Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.4□□□□□ -0.1
TLR4O00206 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
TLR4O00206 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TLR4O00206 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 AJ011931.1-201ENST00000618749 2492 ntBASIC14.39□□□□□ -0.11
TLR4O00206 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 KRT8P28-201ENST00000433288 1390 ntBASIC14.39□□□□□ -0.11
TLR4O00206 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.39□□□□□ -0.11
TLR4O00206 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.39□□□□□ -0.11
TLR4O00206 AC078991.1-201ENST00000437297 610 ntBASIC14.39□□□□□ -0.11
TLR4O00206 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.39□□□□□ -0.11
TLR4O00206 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.39□□□□□ -0.11
TLR4O00206 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TLR4O00206 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 AC092171.5-201ENST00000608012 942 ntBASIC14.39□□□□□ -0.11
TLR4O00206 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.39□□□□□ -0.11
TLR4O00206 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 ACE3P-201ENST00000423435 1973 ntBASIC14.39□□□□□ -0.11
TLR4O00206 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.39□□□□□ -0.11
TLR4O00206 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 KRT18P9-201ENST00000604826 1300 ntBASIC14.39□□□□□ -0.11
TLR4O00206 AC074138.1-201ENST00000611182 1303 ntBASIC14.39□□□□□ -0.11
TLR4O00206 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.39□□□□□ -0.11
TLR4O00206 AL590440.2-201ENST00000641973 1595 ntBASIC14.39□□□□□ -0.11
TLR4O00206 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TLR4O00206 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TLR4O00206 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.38□□□□□ -0.11
TLR4O00206 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.38□□□□□ -0.11
TLR4O00206 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.38□□□□□ -0.11
TLR4O00206 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.38□□□□□ -0.11
TLR4O00206 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.38□□□□□ -0.11
TLR4O00206 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.38□□□□□ -0.11
TLR4O00206 AC139749.1-202ENST00000617529 3139 ntBASIC14.38□□□□□ -0.11
TLR4O00206 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TLR4O00206 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.38□□□□□ -0.11
TLR4O00206 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.38□□□□□ -0.11
TLR4O00206 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 AP000356.3-201ENST00000382243 753 ntBASIC14.38□□□□□ -0.11
TLR4O00206 BANF1P3-201ENST00000412556 261 ntBASIC14.38□□□□□ -0.11
TLR4O00206 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TLR4O00206 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.38□□□□□ -0.11
TLR4O00206 AP000358.1-201ENST00000456260 156 ntBASIC14.38□□□□□ -0.11
TLR4O00206 AC003686.1-201ENST00000550956 1034 ntBASIC14.38□□□□□ -0.11
TLR4O00206 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TLR4O00206 AC087045.2-201ENST00000606279 1003 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms