Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AL132642.2-201ENST00000623423 1998 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC148477.5-201ENST00000625164 1645 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CSMD2-204ENST00000373380 4379 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CTNS-203ENST00000399306 803 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RAC2-202ENST00000401529 569 ntTSL 4 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 GCSHP2-201ENST00000560971 527 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC243562.2-201ENST00000561247 970 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC005412.3-201ENST00000580309 715 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC079602.3-201ENST00000623931 403 ntBASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 SF1-209ENST00000433274 2317 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 TXNDC16-201ENST00000281741 4564 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 AC093642.2-201ENST00000625132 4805 ntBASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms