Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
BIVM-ERCC5R4GMW8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 AC091060.1-201ENST00000623524 1766 ntBASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC38.41■■■■□ 3.74
BIVM-ERCC5R4GMW8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC38.4■■■■□ 3.74
BIVM-ERCC5R4GMW8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
BIVM-ERCC5R4GMW8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC38.4■■■■□ 3.74
BIVM-ERCC5R4GMW8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC38.39■■■■□ 3.74
BIVM-ERCC5R4GMW8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
BIVM-ERCC5R4GMW8 AC145676.1-201ENST00000514988 2004 ntBASIC38.39■■■■□ 3.74
BIVM-ERCC5R4GMW8 AC034268.1-201ENST00000441047 882 ntBASIC38.38■■■■□ 3.74
BIVM-ERCC5R4GMW8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC38.38■■■■□ 3.74
BIVM-ERCC5R4GMW8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC38.38■■■■□ 3.73
BIVM-ERCC5R4GMW8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
BIVM-ERCC5R4GMW8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
BIVM-ERCC5R4GMW8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
BIVM-ERCC5R4GMW8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC38.38■■■■□ 3.73
BIVM-ERCC5R4GMW8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC38.37■■■■□ 3.73
BIVM-ERCC5R4GMW8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 YBX1P1-201ENST00000445822 960 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L2-201ENST00000561772 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L6-201ENST00000626483 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L1-201ENST00000627662 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L8-201ENST00000629013 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L3-201ENST00000630187 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L7-201ENST00000630678 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 DUX4L5-201ENST00000630834 1275 ntBASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
BIVM-ERCC5R4GMW8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 GRAMD4P2-201ENST00000423297 1097 ntBASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 HLA-L-211ENST00000482052 1765 ntBASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
BIVM-ERCC5R4GMW8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 IGHV3-19-201ENST00000521488 291 ntBASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 AC012414.1-201ENST00000556676 535 ntBASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC38.34■■■■□ 3.73
BIVM-ERCC5R4GMW8 ALDH1A3-203ENST00000557963 1670 ntBASIC38.33■■■■□ 3.73
BIVM-ERCC5R4GMW8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC38.33■■■■□ 3.73
BIVM-ERCC5R4GMW8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC38.33■■■■□ 3.73
BIVM-ERCC5R4GMW8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC38.33■■■■□ 3.73
BIVM-ERCC5R4GMW8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 pRNA.6-201ENST00000610482 90 ntBASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 pRNA.5-201ENST00000612139 90 ntBASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 IKBKGP1-201ENST00000612193 1073 ntBASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 pRNA.11-201ENST00000618423 90 ntBASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 pRNA.13-201ENST00000619112 90 ntBASIC38.32■■■■□ 3.73
BIVM-ERCC5R4GMW8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
BIVM-ERCC5R4GMW8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
BIVM-ERCC5R4GMW8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC38.32■■■■□ 3.72
BIVM-ERCC5R4GMW8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
BIVM-ERCC5R4GMW8 TSPY26P-201ENST00000476365 1326 ntBASIC38.31■■■■□ 3.72
BIVM-ERCC5R4GMW8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC38.31■■■■□ 3.72
BIVM-ERCC5R4GMW8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 AC092437.1-201ENST00000624794 1048 ntBASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC38.3■■■■□ 3.72
BIVM-ERCC5R4GMW8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
BIVM-ERCC5R4GMW8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
BIVM-ERCC5R4GMW8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
BIVM-ERCC5R4GMW8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
BIVM-ERCC5R4GMW8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC38.29■■■■□ 3.72
BIVM-ERCC5R4GMW8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC38.28■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms