Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
DDX49Q9Y6V7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 AC137630.3-201ENST00000607245 391 ntBASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
DDX49Q9Y6V7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 MIR4281-201ENST00000580852 62 ntBASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
DDX49Q9Y6V7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
DDX49Q9Y6V7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 AC021242.3-201ENST00000607598 1377 ntBASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX49Q9Y6V7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
DDX49Q9Y6V7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX49Q9Y6V7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
DDX49Q9Y6V7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27■■□□□ 1.91
DDX49Q9Y6V7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27■■□□□ 1.91
DDX49Q9Y6V7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX49Q9Y6V7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
DDX49Q9Y6V7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 KRT16P3-201ENST00000439127 1283 ntBASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX49Q9Y6V7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 MIR6089-201ENST00000616698 64 ntBASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
DDX49Q9Y6V7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 AL117328.2-201ENST00000624617 1940 ntBASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.97■■□□□ 1.91
DDX49Q9Y6V7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX49Q9Y6V7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
DDX49Q9Y6V7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
DDX49Q9Y6V7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
DDX49Q9Y6V7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
DDX49Q9Y6V7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX49Q9Y6V7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
DDX49Q9Y6V7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
DDX49Q9Y6V7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX49Q9Y6V7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
DDX49Q9Y6V7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms