Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HS3ST3A1Q9Y663 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HS3ST3A1Q9Y663 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 RASA4CP-201ENST00000424092 1398 ntBASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 AC009086.3-201ENST00000623486 1008 ntBASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 AC136469.2-201ENST00000623944 1028 ntBASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HS3ST3A1Q9Y663 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 AC006455.2-201ENST00000429931 906 ntBASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 AC105265.2-201ENST00000467189 838 ntBASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HS3ST3A1Q9Y663 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.38■■□□□ 1.17
HS3ST3A1Q9Y663 MIR3181-201ENST00000578512 73 ntBASIC22.38■■□□□ 1.17
HS3ST3A1Q9Y663 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.38■■□□□ 1.17
HS3ST3A1Q9Y663 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.38■■□□□ 1.17
HS3ST3A1Q9Y663 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 AC027682.1-201ENST00000562846 899 ntBASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 CA15P2-201ENST00000611168 834 ntBASIC22.37■■□□□ 1.17
HS3ST3A1Q9Y663 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 AC138932.3-201ENST00000567634 1902 ntBASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 AC135731.1-201ENST00000569415 2548 ntBASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 AC141586.4-201ENST00000624558 1573 ntBASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.36■■□□□ 1.17
HS3ST3A1Q9Y663 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 AC008764.7-201ENST00000593779 1081 ntBASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HS3ST3A1Q9Y663 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HS3ST3A1Q9Y663 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.33■■□□□ 1.17
HS3ST3A1Q9Y663 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
HS3ST3A1Q9Y663 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HS3ST3A1Q9Y663 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms