Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 C9orf163-202ENST00000624034 2573 ntBASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHGB3Q9Y5G1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGB3Q9Y5G1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB3Q9Y5G1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB3Q9Y5G1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHGB3Q9Y5G1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB3Q9Y5G1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB3Q9Y5G1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB3Q9Y5G1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB3Q9Y5G1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGB3Q9Y5G1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB3Q9Y5G1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB3Q9Y5G1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 BX664725.1-201ENST00000438252 379 ntBASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 AC239859.2-201ENST00000444165 318 ntBASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 MIR4281-201ENST00000580852 62 ntBASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHGB3Q9Y5G1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms