Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.04■■□□□ 1.28
FNDC3AQ9Y2H6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.04■■□□□ 1.28
FNDC3AQ9Y2H6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNDC3AQ9Y2H6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 SNX5-217ENST00000606557 1087 ntBASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3AQ9Y2H6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 AC142381.2-201ENST00000566120 298 ntBASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 LINC00543-201ENST00000567234 1845 ntBASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3AQ9Y2H6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 AC004812.2-201ENST00000611079 2094 ntBASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 ABCB10P4-201ENST00000566803 2184 ntBASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3AQ9Y2H6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 LBH-205ENST00000407930 756 ntTSL 2 BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 RARRES2P6-201ENST00000567333 442 ntBASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 AL022069.1-201ENST00000568025 1636 ntBASIC23■■□□□ 1.27
FNDC3AQ9Y2H6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 AC131274.2-201ENST00000580697 1507 ntBASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 MIR6722-201ENST00000617286 78 ntBASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.99■■□□□ 1.27
FNDC3AQ9Y2H6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 UNC93B3-201ENST00000308076 687 ntBASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3AQ9Y2H6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3AQ9Y2H6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 AL031432.3-201ENST00000607698 485 ntBASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 AL136162.1-201ENST00000607711 1078 ntBASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.96■■□□□ 1.27
FNDC3AQ9Y2H6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.95■■□□□ 1.27
FNDC3AQ9Y2H6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
FNDC3AQ9Y2H6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FNDC3AQ9Y2H6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FNDC3AQ9Y2H6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms