Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA6Q9UN73 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
PCDHA6Q9UN73 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.08■■□□□ 1.77
PCDHA6Q9UN73 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA6Q9UN73 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 AL512631.2-201ENST00000604634 923 ntBASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA6Q9UN73 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA6Q9UN73 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 MIR4466-201ENST00000606121 54 ntBASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA6Q9UN73 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHA6Q9UN73 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PCDHA6Q9UN73 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHA6Q9UN73 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA6Q9UN73 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26■■□□□ 1.75
PCDHA6Q9UN73 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 AL136116.3-201ENST00000402907 1138 ntBASIC26■■□□□ 1.75
PCDHA6Q9UN73 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26■■□□□ 1.75
PCDHA6Q9UN73 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA6Q9UN73 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA6Q9UN73 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA6Q9UN73 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA6Q9UN73 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA6Q9UN73 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA6Q9UN73 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PCDHA6Q9UN73 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms