Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 AL031432.3-201ENST00000607698 485 ntBASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB8Q9UN66 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 AC241377.3-202ENST00000626088 1088 ntBASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 AC241585.3-202ENST00000628937 1088 ntBASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 AC245100.8-202ENST00000629247 1058 ntBASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHB8Q9UN66 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHB8Q9UN66 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
PCDHB8Q9UN66 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 SERBP1P1-201ENST00000396021 1160 ntBASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHB8Q9UN66 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 EDA-201ENST00000338901 1233 ntBASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB8Q9UN66 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB8Q9UN66 SUDS3P1-201ENST00000505831 966 ntBASIC24.18■■□□□ 1.46
PCDHB8Q9UN66 AC142381.2-201ENST00000566120 298 ntBASIC24.18■■□□□ 1.46
PCDHB8Q9UN66 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHB8Q9UN66 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB8Q9UN66 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 AL138724.1-201ENST00000606771 1088 ntBASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 AL355001.2-201ENST00000620617 1191 ntBASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHB8Q9UN66 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB8Q9UN66 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB8Q9UN66 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB8Q9UN66 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
PCDHB8Q9UN66 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB8Q9UN66 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB8Q9UN66 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB8Q9UN66 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB8Q9UN66 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
PCDHB8Q9UN66 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 AC006455.2-201ENST00000429931 906 ntBASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 AC011298.3-201ENST00000615796 283 ntBASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 AC009086.3-201ENST00000623486 1008 ntBASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
PCDHB8Q9UN66 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 MIR935-201ENST00000401179 91 ntBASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 MIR4767-201ENST00000582827 78 ntBASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB8Q9UN66 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 AC141586.4-201ENST00000624558 1573 ntBASIC24.12■■□□□ 1.45
PCDHB8Q9UN66 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PCDHB8Q9UN66 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB8Q9UN66 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHB8Q9UN66 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB8Q9UN66 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms