Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.22■□□□□ 0.67
COMMD9Q9P000 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD9Q9P000 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
COMMD9Q9P000 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
COMMD9Q9P000 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD9Q9P000 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.21■□□□□ 0.67
COMMD9Q9P000 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD9Q9P000 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COMMD9Q9P000 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COMMD9Q9P000 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD9Q9P000 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD9Q9P000 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.2■□□□□ 0.66
COMMD9Q9P000 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COMMD9Q9P000 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COMMD9Q9P000 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 SMPD5-203ENST00000639008 1464 ntBASIC19.19■□□□□ 0.66
COMMD9Q9P000 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.19■□□□□ 0.66
COMMD9Q9P000 C1orf229-201ENST00000623686 2258 ntBASIC19.19■□□□□ 0.66
COMMD9Q9P000 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD9Q9P000 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD9Q9P000 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COMMD9Q9P000 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
COMMD9Q9P000 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD9Q9P000 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COMMD9Q9P000 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD9Q9P000 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD9Q9P000 AC092296.2-201ENST00000589470 999 ntBASIC19.17■□□□□ 0.66
COMMD9Q9P000 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD9Q9P000 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD9Q9P000 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD9Q9P000 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD9Q9P000 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD9Q9P000 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COMMD9Q9P000 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COMMD9Q9P000 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD9Q9P000 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD9Q9P000 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD9Q9P000 GUSBP5-202ENST00000510805 1989 ntBASIC19.16■□□□□ 0.66
COMMD9Q9P000 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD9Q9P000 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD9Q9P000 MIR6089-201ENST00000616698 64 ntBASIC19.16■□□□□ 0.66
COMMD9Q9P000 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD9Q9P000 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD9Q9P000 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD9Q9P000 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD9Q9P000 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD9Q9P000 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD9Q9P000 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD9Q9P000 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.14■□□□□ 0.65
COMMD9Q9P000 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD9Q9P000 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COMMD9Q9P000 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
COMMD9Q9P000 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms