Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
MRPL35Q9NZE8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 MIR219A2-201ENST00000608502 1504 ntBASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL35Q9NZE8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL35Q9NZE8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 AC242852.2-201ENST00000615738 1807 ntBASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 ZNRF2P2-203ENST00000454624 420 ntBASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL35Q9NZE8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL35Q9NZE8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.02■□□□□ 0.16
MRPL35Q9NZE8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL35Q9NZE8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL35Q9NZE8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms