Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CUEDC1Q9NWM3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CUEDC1Q9NWM3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 AL139246.5-201ENST00000606645 996 ntBASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CUEDC1Q9NWM3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CUEDC1Q9NWM3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CUEDC1Q9NWM3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CUEDC1Q9NWM3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CUEDC1Q9NWM3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 AC005703.6-201ENST00000623265 1329 ntBASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 MIR6724-1-201ENST00000616420 92 ntBASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 MIR6724-2-201ENST00000616483 92 ntBASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 MIR6724-4-201ENST00000617390 92 ntBASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 MIR6724-3-201ENST00000622482 92 ntBASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CUEDC1Q9NWM3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CUEDC1Q9NWM3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CUEDC1Q9NWM3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CUEDC1Q9NWM3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.84■■□□□ 1.09
CUEDC1Q9NWM3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CUEDC1Q9NWM3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CUEDC1Q9NWM3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CUEDC1Q9NWM3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.83■■□□□ 1.09
CUEDC1Q9NWM3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.83■■□□□ 1.09
CUEDC1Q9NWM3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms