Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V0A4Q9HBG4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.27■■□□□ 1.64
ATP6V0A4Q9HBG4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A4Q9HBG4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V0A4Q9HBG4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 AC133561.4-201ENST00000566112 224 ntBASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
ATP6V0A4Q9HBG4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A4Q9HBG4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A4Q9HBG4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V0A4Q9HBG4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A4Q9HBG4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP6V0A4Q9HBG4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
ATP6V0A4Q9HBG4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
ATP6V0A4Q9HBG4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
ATP6V0A4Q9HBG4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ATP6V0A4Q9HBG4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
ATP6V0A4Q9HBG4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ATP6V0A4Q9HBG4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
ATP6V0A4Q9HBG4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 PBX2P1-201ENST00000493219 1291 ntBASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP6V0A4Q9HBG4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.17■■□□□ 1.62
ATP6V0A4Q9HBG4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 AC004812.2-201ENST00000611079 2094 ntBASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.16■■□□□ 1.62
ATP6V0A4Q9HBG4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 AC009102.2-201ENST00000606772 1639 ntBASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 SRD5A1P1-201ENST00000442297 786 ntBASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 AC106739.1-201ENST00000617035 715 ntBASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms