Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 MIR939-201ENST00000401314 82 ntBASIC26.54■■□□□ 1.84
SH2D4AQ9H788 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SH2D4AQ9H788 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 ZNRF2P3-201ENST00000424200 374 ntBASIC26.53■■□□□ 1.84
SH2D4AQ9H788 AP001330.3-201ENST00000520123 633 ntBASIC26.53■■□□□ 1.84
SH2D4AQ9H788 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 AL136967.2-201ENST00000623968 743 ntBASIC26.53■■□□□ 1.84
SH2D4AQ9H788 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.53■■□□□ 1.84
SH2D4AQ9H788 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 AC091305.1-201ENST00000479476 895 ntBASIC26.52■■□□□ 1.84
SH2D4AQ9H788 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.52■■□□□ 1.84
SH2D4AQ9H788 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.51■■□□□ 1.84
SH2D4AQ9H788 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.51■■□□□ 1.83
SH2D4AQ9H788 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.5■■□□□ 1.83
SH2D4AQ9H788 AC009086.3-201ENST00000623486 1008 ntBASIC26.5■■□□□ 1.83
SH2D4AQ9H788 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.49■■□□□ 1.83
SH2D4AQ9H788 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SH2D4AQ9H788 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.49■■□□□ 1.83
SH2D4AQ9H788 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SH2D4AQ9H788 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SH2D4AQ9H788 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SH2D4AQ9H788 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 AC105265.2-201ENST00000467189 838 ntBASIC26.47■■□□□ 1.83
SH2D4AQ9H788 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 AC027682.1-201ENST00000562846 899 ntBASIC26.47■■□□□ 1.83
SH2D4AQ9H788 AC136469.2-201ENST00000623944 1028 ntBASIC26.47■■□□□ 1.83
SH2D4AQ9H788 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 AC142381.3-201ENST00000568208 1670 ntBASIC26.47■■□□□ 1.83
SH2D4AQ9H788 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SH2D4AQ9H788 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SH2D4AQ9H788 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.45■■□□□ 1.83
SH2D4AQ9H788 AC006455.2-201ENST00000429931 906 ntBASIC26.45■■□□□ 1.82
SH2D4AQ9H788 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SH2D4AQ9H788 RASA4CP-201ENST00000424092 1398 ntBASIC26.45■■□□□ 1.82
SH2D4AQ9H788 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SH2D4AQ9H788 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms