Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KDM4CQ9H3R0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM4CQ9H3R0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 AC008406.3-201ENST00000620001 1374 ntBASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM4CQ9H3R0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 C9orf163-202ENST00000624034 2573 ntBASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.49■■□□□ 1.35
KDM4CQ9H3R0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 AC090877.2-201ENST00000558441 1738 ntBASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 AC010997.5-201ENST00000609182 354 ntBASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 AF131216.4-201ENST00000638924 1588 ntBASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.48■■□□□ 1.35
KDM4CQ9H3R0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
KDM4CQ9H3R0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM4CQ9H3R0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM4CQ9H3R0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
KDM4CQ9H3R0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KDM4CQ9H3R0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
KDM4CQ9H3R0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MTDHP2-201ENST00000601468 714 ntBASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MIR6724-1-201ENST00000616420 92 ntBASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MIR6724-2-201ENST00000616483 92 ntBASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MIR6724-4-201ENST00000617390 92 ntBASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 MIR6724-3-201ENST00000622482 92 ntBASIC23.45■■□□□ 1.34
KDM4CQ9H3R0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
KDM4CQ9H3R0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KDM4CQ9H3R0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KDM4CQ9H3R0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.41■■□□□ 1.34
KDM4CQ9H3R0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KDM4CQ9H3R0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KDM4CQ9H3R0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KDM4CQ9H3R0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
KDM4CQ9H3R0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms