Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NELFAQ9H3P2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.14■□□□□ 0.81
NELFAQ9H3P2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.13■□□□□ 0.81
NELFAQ9H3P2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
NELFAQ9H3P2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NELFAQ9H3P2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.11■□□□□ 0.81
NELFAQ9H3P2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 MTDHP2-201ENST00000601468 714 ntBASIC20.1■□□□□ 0.81
NELFAQ9H3P2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
NELFAQ9H3P2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 KRT16P3-201ENST00000439127 1283 ntBASIC20.09■□□□□ 0.81
NELFAQ9H3P2 AL356441.2-201ENST00000443009 864 ntBASIC20.09■□□□□ 0.81
NELFAQ9H3P2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 AC010997.5-201ENST00000609182 354 ntBASIC20.09■□□□□ 0.81
NELFAQ9H3P2 MIR6722-201ENST00000617286 78 ntBASIC20.09■□□□□ 0.81
NELFAQ9H3P2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NELFAQ9H3P2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
NELFAQ9H3P2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.08■□□□□ 0.8
NELFAQ9H3P2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NELFAQ9H3P2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms