Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
VCXQ9H320 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VCXQ9H320 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.62■■□□□ 1.05
VCXQ9H320 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VCXQ9H320 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.62■■□□□ 1.05
VCXQ9H320 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VCXQ9H320 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VCXQ9H320 SUZ12P1-203ENST00000578195 985 ntBASIC21.62■■□□□ 1.05
VCXQ9H320 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCXQ9H320 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VCXQ9H320 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VCXQ9H320 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.62■■□□□ 1.05
VCXQ9H320 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 AL359258.2-201ENST00000564063 1566 ntBASIC21.61■■□□□ 1.05
VCXQ9H320 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.61■■□□□ 1.05
VCXQ9H320 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.61■■□□□ 1.05
VCXQ9H320 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCXQ9H320 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VCXQ9H320 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
VCXQ9H320 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCXQ9H320 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.59■■□□□ 1.05
VCXQ9H320 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
VCXQ9H320 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 ANOS2P-203ENST00000472227 1816 ntBASIC21.59■■□□□ 1.05
VCXQ9H320 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
VCXQ9H320 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCXQ9H320 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCXQ9H320 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
VCXQ9H320 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCXQ9H320 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VCXQ9H320 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCXQ9H320 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
VCXQ9H320 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VCXQ9H320 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.58■■□□□ 1.04
VCXQ9H320 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
VCXQ9H320 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.58■■□□□ 1.04
VCXQ9H320 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VCXQ9H320 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.58■■□□□ 1.04
VCXQ9H320 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VCXQ9H320 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
VCXQ9H320 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VCXQ9H320 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VCXQ9H320 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCXQ9H320 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCXQ9H320 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.56■■□□□ 1.04
VCXQ9H320 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.56■■□□□ 1.04
VCXQ9H320 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VCXQ9H320 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.56■■□□□ 1.04
VCXQ9H320 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VCXQ9H320 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
VCXQ9H320 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 DUX4L28-201ENST00000623687 678 ntBASIC21.55■■□□□ 1.04
VCXQ9H320 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.55■■□□□ 1.04
VCXQ9H320 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.55■■□□□ 1.04
VCXQ9H320 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VCXQ9H320 AC092068.2-201ENST00000590491 1708 ntBASIC21.55■■□□□ 1.04
VCXQ9H320 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCXQ9H320 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
VCXQ9H320 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
VCXQ9H320 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VCXQ9H320 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCXQ9H320 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCXQ9H320 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VCXQ9H320 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VCXQ9H320 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VCXQ9H320 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VCXQ9H320 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms