Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 AL022069.1-201ENST00000568025 1636 ntBASIC23.62■■□□□ 1.37
DDX47Q9H0S4 LINC00526-201ENST00000581067 1875 ntBASIC23.62■■□□□ 1.37
DDX47Q9H0S4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX47Q9H0S4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
DDX47Q9H0S4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX47Q9H0S4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.59■■□□□ 1.37
DDX47Q9H0S4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX47Q9H0S4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
DDX47Q9H0S4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX47Q9H0S4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX47Q9H0S4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX47Q9H0S4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX47Q9H0S4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX47Q9H0S4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX47Q9H0S4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 AC131274.2-201ENST00000580697 1507 ntBASIC23.55■■□□□ 1.36
DDX47Q9H0S4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX47Q9H0S4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 ALDH1A3-203ENST00000557963 1670 ntBASIC23.54■■□□□ 1.36
DDX47Q9H0S4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 ECEL1P1-201ENST00000373592 1742 ntBASIC23.54■■□□□ 1.36
DDX47Q9H0S4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 DUX4L9-201ENST00000449051 1259 ntBASIC23.54■■□□□ 1.36
DDX47Q9H0S4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX47Q9H0S4 MIR6765-201ENST00000614092 87 ntBASIC23.54■■□□□ 1.36
DDX47Q9H0S4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms