Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF38Q9H0F5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF38Q9H0F5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF38Q9H0F5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.64■■□□□ 1.38
RNF38Q9H0F5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
RNF38Q9H0F5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF38Q9H0F5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF38Q9H0F5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF38Q9H0F5 SYT6-210ENST00000641643 1587 ntBASIC23.63■■□□□ 1.37
RNF38Q9H0F5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 SERBP1P1-201ENST00000396021 1160 ntBASIC23.62■■□□□ 1.37
RNF38Q9H0F5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF38Q9H0F5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF38Q9H0F5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 AC142381.2-201ENST00000566120 298 ntBASIC23.6■■□□□ 1.37
RNF38Q9H0F5 AC092171.4-201ENST00000609130 632 ntBASIC23.6■■□□□ 1.37
RNF38Q9H0F5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RNF38Q9H0F5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 EDA-201ENST00000338901 1233 ntBASIC23.59■■□□□ 1.37
RNF38Q9H0F5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 AL355001.2-201ENST00000620617 1191 ntBASIC23.59■■□□□ 1.37
RNF38Q9H0F5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF38Q9H0F5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF38Q9H0F5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF38Q9H0F5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF38Q9H0F5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF38Q9H0F5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF38Q9H0F5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.58■■□□□ 1.36
RNF38Q9H0F5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.57■■□□□ 1.36
RNF38Q9H0F5 AC006455.2-201ENST00000429931 906 ntBASIC23.57■■□□□ 1.36
RNF38Q9H0F5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.57■■□□□ 1.36
RNF38Q9H0F5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF38Q9H0F5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF38Q9H0F5 AL136967.2-201ENST00000623968 743 ntBASIC23.56■■□□□ 1.36
RNF38Q9H0F5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF38Q9H0F5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF38Q9H0F5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 ZNRF2P3-201ENST00000424200 374 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 MIR4767-201ENST00000582827 78 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 AC241377.3-202ENST00000626088 1088 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 AC241585.3-202ENST00000628937 1088 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 AC245100.8-202ENST00000629247 1058 ntBASIC23.55■■□□□ 1.36
RNF38Q9H0F5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF38Q9H0F5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF38Q9H0F5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF38Q9H0F5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF38Q9H0F5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF38Q9H0F5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RNF38Q9H0F5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms