Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 AL031602.1-201ENST00000633169 911 ntBASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
RTFDC1Q9BY42 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTFDC1Q9BY42 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
RTFDC1Q9BY42 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
RTFDC1Q9BY42 AC090192.1-201ENST00000517740 490 ntBASIC27.89■■■□□ 2.06
RTFDC1Q9BY42 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.89■■■□□ 2.06
RTFDC1Q9BY42 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
RTFDC1Q9BY42 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RTFDC1Q9BY42 KRT18P5-201ENST00000436075 1291 ntBASIC27.88■■■□□ 2.05
RTFDC1Q9BY42 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.88■■■□□ 2.05
RTFDC1Q9BY42 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.88■■■□□ 2.05
RTFDC1Q9BY42 IKBKGP1-201ENST00000612193 1073 ntBASIC27.88■■■□□ 2.05
RTFDC1Q9BY42 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
RTFDC1Q9BY42 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTFDC1Q9BY42 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTFDC1Q9BY42 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
RTFDC1Q9BY42 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
RTFDC1Q9BY42 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.86■■■□□ 2.05
RTFDC1Q9BY42 AL161729.1-201ENST00000604104 1402 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 pRNA.6-201ENST00000610482 90 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 pRNA.5-201ENST00000612139 90 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 pRNA.11-201ENST00000618423 90 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 pRNA.13-201ENST00000619112 90 ntBASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTFDC1Q9BY42 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 AC092437.1-201ENST00000624794 1048 ntBASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTFDC1Q9BY42 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L2-201ENST00000561772 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 AC126544.1-201ENST00000580842 1059 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L6-201ENST00000626483 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L1-201ENST00000627662 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L8-201ENST00000629013 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L3-201ENST00000630187 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L7-201ENST00000630678 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 DUX4L5-201ENST00000630834 1275 ntBASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
RTFDC1Q9BY42 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.04
RTFDC1Q9BY42 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.04
RTFDC1Q9BY42 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.04
RTFDC1Q9BY42 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.82■■■□□ 2.04
RTFDC1Q9BY42 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 TSPY26P-201ENST00000476365 1326 ntBASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTFDC1Q9BY42 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 AC027612.3-201ENST00000413684 1047 ntBASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 SLC47A1P1-202ENST00000449666 945 ntBASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms