Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZKSCAN3Q9BRR0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
ZKSCAN3Q9BRR0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZKSCAN3Q9BRR0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZKSCAN3Q9BRR0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZKSCAN3Q9BRR0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZKSCAN3Q9BRR0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZKSCAN3Q9BRR0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.74■■□□□ 1.87
ZKSCAN3Q9BRR0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.74■■□□□ 1.87
ZKSCAN3Q9BRR0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ZKSCAN3Q9BRR0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 AL512631.2-201ENST00000604634 923 ntBASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 MIR4466-201ENST00000606121 54 ntBASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZKSCAN3Q9BRR0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.72■■□□□ 1.87
ZKSCAN3Q9BRR0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZKSCAN3Q9BRR0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
ZKSCAN3Q9BRR0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.7■■□□□ 1.87
ZKSCAN3Q9BRR0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ZKSCAN3Q9BRR0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 AC008406.3-201ENST00000620001 1374 ntBASIC26.69■■□□□ 1.86
ZKSCAN3Q9BRR0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZKSCAN3Q9BRR0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZKSCAN3Q9BRR0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 AC009102.2-201ENST00000606772 1639 ntBASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZKSCAN3Q9BRR0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ZKSCAN3Q9BRR0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 AL136116.3-201ENST00000402907 1138 ntBASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
ZKSCAN3Q9BRR0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ZKSCAN3Q9BRR0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.64■■□□□ 1.85
ZKSCAN3Q9BRR0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
ZKSCAN3Q9BRR0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.63■■□□□ 1.85
ZKSCAN3Q9BRR0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms