Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.55■□□□□ 0.24
MUC4Q99102 AC131274.2-201ENST00000580697 1507 ntBASIC16.55■□□□□ 0.24
MUC4Q99102 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MUC4Q99102 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.54■□□□□ 0.24
MUC4Q99102 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MUC4Q99102 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.54■□□□□ 0.24
MUC4Q99102 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MUC4Q99102 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.54■□□□□ 0.24
MUC4Q99102 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.54■□□□□ 0.24
MUC4Q99102 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.54■□□□□ 0.24
MUC4Q99102 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MUC4Q99102 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 GUSBP5-201ENST00000418136 578 ntBASIC16.53■□□□□ 0.24
MUC4Q99102 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.53■□□□□ 0.24
MUC4Q99102 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.53■□□□□ 0.24
MUC4Q99102 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MUC4Q99102 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MUC4Q99102 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.53■□□□□ 0.24
MUC4Q99102 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
MUC4Q99102 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.53■□□□□ 0.24
MUC4Q99102 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
MUC4Q99102 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MUC4Q99102 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MUC4Q99102 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
MUC4Q99102 AC233723.2-201ENST00000623798 2106 ntBASIC16.52■□□□□ 0.24
MUC4Q99102 AC011551.1-201ENST00000614101 683 ntBASIC16.52■□□□□ 0.24
MUC4Q99102 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MUC4Q99102 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MUC4Q99102 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
MUC4Q99102 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MUC4Q99102 AL161729.1-201ENST00000604104 1402 ntBASIC16.52■□□□□ 0.23
MUC4Q99102 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MUC4Q99102 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
MUC4Q99102 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.51■□□□□ 0.23
MUC4Q99102 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.51■□□□□ 0.23
MUC4Q99102 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MUC4Q99102 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.51■□□□□ 0.23
MUC4Q99102 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MUC4Q99102 AC103724.3-201ENST00000564481 992 ntBASIC16.51■□□□□ 0.23
MUC4Q99102 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MUC4Q99102 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MUC4Q99102 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
MUC4Q99102 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MUC4Q99102 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
MUC4Q99102 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MUC4Q99102 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MUC4Q99102 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MUC4Q99102 MIR4281-201ENST00000580852 62 ntBASIC16.5■□□□□ 0.23
MUC4Q99102 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MUC4Q99102 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
MUC4Q99102 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MUC4Q99102 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.49■□□□□ 0.23
MUC4Q99102 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
MUC4Q99102 AC010980.1-201ENST00000587192 1142 ntBASIC16.49■□□□□ 0.23
MUC4Q99102 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MUC4Q99102 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MUC4Q99102 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.49■□□□□ 0.23
MUC4Q99102 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MUC4Q99102 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MUC4Q99102 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.49■□□□□ 0.23
MUC4Q99102 LONRF2P2-201ENST00000439212 571 ntBASIC16.48■□□□□ 0.23
MUC4Q99102 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.48■□□□□ 0.23
MUC4Q99102 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MUC4Q99102 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.48■□□□□ 0.23
MUC4Q99102 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.48■□□□□ 0.23
MUC4Q99102 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MUC4Q99102 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MUC4Q99102 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.48■□□□□ 0.23
MUC4Q99102 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MUC4Q99102 BHLHE23-202ENST00000612929 1109 ntBASIC16.48■□□□□ 0.23
MUC4Q99102 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MUC4Q99102 C1orf229-201ENST00000623686 2258 ntBASIC16.48■□□□□ 0.23
MUC4Q99102 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MUC4Q99102 AL022069.1-201ENST00000568025 1636 ntBASIC16.48■□□□□ 0.23
MUC4Q99102 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MUC4Q99102 AL117328.2-201ENST00000624617 1940 ntBASIC16.47■□□□□ 0.23
MUC4Q99102 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MUC4Q99102 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MUC4Q99102 EP400NL-214ENST00000641289 2402 ntBASIC16.47■□□□□ 0.23
MUC4Q99102 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms