Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.49■■□□□ 1.51
CASD1Q96PB1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.49■■□□□ 1.51
CASD1Q96PB1 AC087623.3-201ENST00000607047 1098 ntBASIC24.49■■□□□ 1.51
CASD1Q96PB1 AC233992.3-201ENST00000607491 485 ntBASIC24.49■■□□□ 1.51
CASD1Q96PB1 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.49■■□□□ 1.51
CASD1Q96PB1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
CASD1Q96PB1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.49■■□□□ 1.51
CASD1Q96PB1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.49■■□□□ 1.51
CASD1Q96PB1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASD1Q96PB1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASD1Q96PB1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.48■■□□□ 1.51
CASD1Q96PB1 ALDH1A3-203ENST00000557963 1670 ntBASIC24.48■■□□□ 1.51
CASD1Q96PB1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CASD1Q96PB1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CASD1Q96PB1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.47■■□□□ 1.51
CASD1Q96PB1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CASD1Q96PB1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CASD1Q96PB1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CASD1Q96PB1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CASD1Q96PB1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.47■■□□□ 1.51
CASD1Q96PB1 BX842568.3-201ENST00000418104 571 ntBASIC24.47■■□□□ 1.51
CASD1Q96PB1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CASD1Q96PB1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.46■■□□□ 1.51
CASD1Q96PB1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.46■■□□□ 1.51
CASD1Q96PB1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.46■■□□□ 1.51
CASD1Q96PB1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CASD1Q96PB1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CASD1Q96PB1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CASD1Q96PB1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CASD1Q96PB1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.45■■□□□ 1.5
CASD1Q96PB1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.45■■□□□ 1.5
CASD1Q96PB1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.45■■□□□ 1.5
CASD1Q96PB1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CASD1Q96PB1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CASD1Q96PB1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.45■■□□□ 1.5
CASD1Q96PB1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASD1Q96PB1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASD1Q96PB1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CASD1Q96PB1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASD1Q96PB1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.44■■□□□ 1.5
CASD1Q96PB1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASD1Q96PB1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CASD1Q96PB1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.43■■□□□ 1.5
CASD1Q96PB1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.43■■□□□ 1.5
CASD1Q96PB1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.43■■□□□ 1.5
CASD1Q96PB1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 pRNA.6-201ENST00000610482 90 ntBASIC24.43■■□□□ 1.5
CASD1Q96PB1 pRNA.5-201ENST00000612139 90 ntBASIC24.43■■□□□ 1.5
CASD1Q96PB1 pRNA.11-201ENST00000618423 90 ntBASIC24.43■■□□□ 1.5
CASD1Q96PB1 pRNA.13-201ENST00000619112 90 ntBASIC24.43■■□□□ 1.5
CASD1Q96PB1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CASD1Q96PB1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASD1Q96PB1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASD1Q96PB1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASD1Q96PB1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.42■■□□□ 1.5
CASD1Q96PB1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASD1Q96PB1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASD1Q96PB1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.42■■□□□ 1.5
CASD1Q96PB1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CASD1Q96PB1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.41■■□□□ 1.5
CASD1Q96PB1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CASD1Q96PB1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASD1Q96PB1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.41■■□□□ 1.5
CASD1Q96PB1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASD1Q96PB1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASD1Q96PB1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.4■■□□□ 1.5
CASD1Q96PB1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.4■■□□□ 1.5
CASD1Q96PB1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.4■■□□□ 1.5
CASD1Q96PB1 AL162430.1-201ENST00000480705 870 ntBASIC24.4■■□□□ 1.5
CASD1Q96PB1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASD1Q96PB1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CASD1Q96PB1 AC141586.4-201ENST00000624558 1573 ntBASIC24.39■■□□□ 1.5
CASD1Q96PB1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.39■■□□□ 1.49
CASD1Q96PB1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CASD1Q96PB1 AC022211.4-201ENST00000625094 2161 ntBASIC24.39■■□□□ 1.49
CASD1Q96PB1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CASD1Q96PB1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CASD1Q96PB1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASD1Q96PB1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CASD1Q96PB1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.37■■□□□ 1.49
CASD1Q96PB1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms