Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFP3Q96NJ6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP3Q96NJ6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP3Q96NJ6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP3Q96NJ6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP3Q96NJ6 AP003733.4-201ENST00000623785 1697 ntBASIC20.64■□□□□ 0.9
ZFP3Q96NJ6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP3Q96NJ6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZFP3Q96NJ6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 AC131281.2-201ENST00000520478 145 ntBASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 AC079834.2-201ENST00000609776 1949 ntBASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFP3Q96NJ6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFP3Q96NJ6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFP3Q96NJ6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 MIR6089-201ENST00000616698 64 ntBASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFP3Q96NJ6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 AC004448.1-201ENST00000458332 883 ntBASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
ZFP3Q96NJ6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.58■□□□□ 0.88
ZFP3Q96NJ6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZFP3Q96NJ6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.58■□□□□ 0.88
ZFP3Q96NJ6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.58■□□□□ 0.88
ZFP3Q96NJ6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFP3Q96NJ6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms