Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 AC009086.3-201ENST00000623486 1008 ntBASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZSWIM3Q96MP5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZSWIM3Q96MP5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 IRS3P-201ENST00000223076 1006 ntBASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZSWIM3Q96MP5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZSWIM3Q96MP5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 AC233992.3-201ENST00000607491 485 ntBASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZSWIM3Q96MP5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ZSWIM3Q96MP5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
ZSWIM3Q96MP5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 AL161729.1-201ENST00000604104 1402 ntBASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 ALDH1A3-203ENST00000557963 1670 ntBASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 AC135731.1-201ENST00000569415 2548 ntBASIC23.57■■□□□ 1.36
ZSWIM3Q96MP5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZSWIM3Q96MP5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 BX842568.3-201ENST00000418104 571 ntBASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 AL162430.1-201ENST00000480705 870 ntBASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
ZSWIM3Q96MP5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 pRNA.6-201ENST00000610482 90 ntBASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 pRNA.5-201ENST00000612139 90 ntBASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 pRNA.11-201ENST00000618423 90 ntBASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 pRNA.13-201ENST00000619112 90 ntBASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
ZSWIM3Q96MP5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZSWIM3Q96MP5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
ZSWIM3Q96MP5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZSWIM3Q96MP5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms