Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
IFT43Q96FT9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
IFT43Q96FT9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 AC004812.2-201ENST00000611079 2094 ntBASIC23.25■■□□□ 1.31
IFT43Q96FT9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
IFT43Q96FT9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.25■■□□□ 1.31
IFT43Q96FT9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
IFT43Q96FT9 AC131274.2-201ENST00000580697 1507 ntBASIC23.24■■□□□ 1.31
IFT43Q96FT9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
IFT43Q96FT9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.24■■□□□ 1.31
IFT43Q96FT9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
IFT43Q96FT9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
IFT43Q96FT9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.24■■□□□ 1.31
IFT43Q96FT9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IFT43Q96FT9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
IFT43Q96FT9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
IFT43Q96FT9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
IFT43Q96FT9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.23■■□□□ 1.31
IFT43Q96FT9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
IFT43Q96FT9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
IFT43Q96FT9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
IFT43Q96FT9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
IFT43Q96FT9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.22■■□□□ 1.31
IFT43Q96FT9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.22■■□□□ 1.31
IFT43Q96FT9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
IFT43Q96FT9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IFT43Q96FT9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
IFT43Q96FT9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
IFT43Q96FT9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
IFT43Q96FT9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.21■■□□□ 1.31
IFT43Q96FT9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.21■■□□□ 1.31
IFT43Q96FT9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.21■■□□□ 1.31
IFT43Q96FT9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
IFT43Q96FT9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
IFT43Q96FT9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IFT43Q96FT9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IFT43Q96FT9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.2■■□□□ 1.3
IFT43Q96FT9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IFT43Q96FT9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
IFT43Q96FT9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IFT43Q96FT9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
IFT43Q96FT9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
IFT43Q96FT9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 AC010997.5-201ENST00000609182 354 ntBASIC23.19■■□□□ 1.3
IFT43Q96FT9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
IFT43Q96FT9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
IFT43Q96FT9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
IFT43Q96FT9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
IFT43Q96FT9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.18■■□□□ 1.3
IFT43Q96FT9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.18■■□□□ 1.3
IFT43Q96FT9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
IFT43Q96FT9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
IFT43Q96FT9 ABCB10P4-201ENST00000566803 2184 ntBASIC23.18■■□□□ 1.3
IFT43Q96FT9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IFT43Q96FT9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.17■■□□□ 1.3
IFT43Q96FT9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
IFT43Q96FT9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IFT43Q96FT9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.17■■□□□ 1.3
IFT43Q96FT9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.17■■□□□ 1.3
IFT43Q96FT9 MIR6724-1-201ENST00000616420 92 ntBASIC23.17■■□□□ 1.3
IFT43Q96FT9 MIR6724-2-201ENST00000616483 92 ntBASIC23.17■■□□□ 1.3
IFT43Q96FT9 MIR6724-4-201ENST00000617390 92 ntBASIC23.17■■□□□ 1.3
IFT43Q96FT9 MIR6724-3-201ENST00000622482 92 ntBASIC23.17■■□□□ 1.3
IFT43Q96FT9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
IFT43Q96FT9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
IFT43Q96FT9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
IFT43Q96FT9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
IFT43Q96FT9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.16■■□□□ 1.3
IFT43Q96FT9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
IFT43Q96FT9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.16■■□□□ 1.3
IFT43Q96FT9 AC004448.1-201ENST00000458332 883 ntBASIC23.16■■□□□ 1.3
IFT43Q96FT9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.16■■□□□ 1.3
IFT43Q96FT9 MTDHP2-201ENST00000601468 714 ntBASIC23.16■■□□□ 1.3
IFT43Q96FT9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
IFT43Q96FT9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.15■■□□□ 1.3
IFT43Q96FT9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.15■■□□□ 1.3
IFT43Q96FT9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
IFT43Q96FT9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IFT43Q96FT9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IFT43Q96FT9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.15■■□□□ 1.3
IFT43Q96FT9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms