Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.32■■□□□ 1
SLC47A1Q96FL8 GUSBP5-202ENST00000510805 1989 ntBASIC21.31■■□□□ 1
SLC47A1Q96FL8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC47A1Q96FL8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC47A1Q96FL8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC47A1Q96FL8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.31■■□□□ 1
SLC47A1Q96FL8 AL161729.1-201ENST00000604104 1402 ntBASIC21.3■■□□□ 1
SLC47A1Q96FL8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC47A1Q96FL8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC47A1Q96FL8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC47A1Q96FL8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.3■■□□□ 1
SLC47A1Q96FL8 LINC00526-201ENST00000581067 1875 ntBASIC21.3■■□□□ 1
SLC47A1Q96FL8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.29■■□□□ 1
SLC47A1Q96FL8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.29■■□□□ 1
SLC47A1Q96FL8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 AC090877.2-201ENST00000558441 1738 ntBASIC21.29■■□□□ 1
SLC47A1Q96FL8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC47A1Q96FL8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SLC47A1Q96FL8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.28■■□□□ 1
SLC47A1Q96FL8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC47A1Q96FL8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.28■■□□□ 1
SLC47A1Q96FL8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC47A1Q96FL8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC47A1Q96FL8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC47A1Q96FL8 AC129492.7-201ENST00000622992 756 ntBASIC21.28■■□□□ 1
SLC47A1Q96FL8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC47A1Q96FL8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC47A1Q96FL8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SLC47A1Q96FL8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.27■■□□□ 1
SLC47A1Q96FL8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.27■■□□□ 1
SLC47A1Q96FL8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 ABHD17AP5-201ENST00000580133 923 ntBASIC21.27■■□□□ 1
SLC47A1Q96FL8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
SLC47A1Q96FL8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SLC47A1Q96FL8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC47A1Q96FL8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SLC47A1Q96FL8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC47A1Q96FL8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 KRT18P60-201ENST00000312876 1297 ntBASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC47A1Q96FL8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 AL592295.1-201ENST00000400984 884 ntBASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC47A1Q96FL8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms