Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCD3Q96EY7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD3Q96EY7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD3Q96EY7 AC090877.2-201ENST00000558441 1738 ntBASIC22.5■■□□□ 1.19
PTCD3Q96EY7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
PTCD3Q96EY7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 C1orf229-201ENST00000623686 2258 ntBASIC22.48■■□□□ 1.19
PTCD3Q96EY7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 AC022616.5-201ENST00000518796 181 ntBASIC22.48■■□□□ 1.19
PTCD3Q96EY7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCD3Q96EY7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PTCD3Q96EY7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 AC137767.1-201ENST00000602918 1920 ntBASIC22.46■■□□□ 1.19
PTCD3Q96EY7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCD3Q96EY7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
PTCD3Q96EY7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 AL033527.3-201ENST00000566366 1196 ntBASIC22.45■■□□□ 1.18
PTCD3Q96EY7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCD3Q96EY7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCD3Q96EY7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 ANOS2P-203ENST00000472227 1816 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 AC127496.7-201ENST00000625110 1798 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 AL024507.2-201ENST00000606070 2574 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 AC011551.1-201ENST00000614101 683 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 GUSBP5-202ENST00000510805 1989 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 DUSP8P3-201ENST00000399571 1760 ntBASIC22.43■■□□□ 1.18
PTCD3Q96EY7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCD3Q96EY7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCD3Q96EY7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms