Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.48■□□□□ 0.87
HPS1Q92902 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HPS1Q92902 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HPS1Q92902 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS1Q92902 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS1Q92902 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HPS1Q92902 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HPS1Q92902 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS1Q92902 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS1Q92902 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS1Q92902 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS1Q92902 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS1Q92902 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS1Q92902 AC018755.3-202ENST00000596210 929 ntBASIC20.47■□□□□ 0.87
HPS1Q92902 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HPS1Q92902 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HPS1Q92902 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS1Q92902 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HPS1Q92902 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS1Q92902 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HPS1Q92902 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HPS1Q92902 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPS1Q92902 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS1Q92902 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS1Q92902 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HPS1Q92902 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS1Q92902 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS1Q92902 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 AC139795.1-202ENST00000500444 432 ntBASIC20.45■□□□□ 0.86
HPS1Q92902 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS1Q92902 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS1Q92902 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HPS1Q92902 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS1Q92902 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS1Q92902 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS1Q92902 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS1Q92902 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS1Q92902 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS1Q92902 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.43■□□□□ 0.86
HPS1Q92902 LINC00526-201ENST00000581067 1875 ntBASIC20.43■□□□□ 0.86
HPS1Q92902 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HPS1Q92902 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HPS1Q92902 AC141586.4-201ENST00000624558 1573 ntBASIC20.43■□□□□ 0.86
HPS1Q92902 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 SPCS2P3-201ENST00000500401 656 ntBASIC20.43■□□□□ 0.86
HPS1Q92902 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS1Q92902 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 AC127496.7-201ENST00000625110 1798 ntBASIC20.42■□□□□ 0.86
HPS1Q92902 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HPS1Q92902 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.42■□□□□ 0.86
HPS1Q92902 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS1Q92902 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS1Q92902 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS1Q92902 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS1Q92902 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS1Q92902 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS1Q92902 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS1Q92902 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS1Q92902 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 FOXO3B-201ENST00000395675 1928 ntBASIC20.41■□□□□ 0.86
HPS1Q92902 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HPS1Q92902 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS1Q92902 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.4■□□□□ 0.86
HPS1Q92902 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms