Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.25■■□□□ 1.47
DDX1Q92499 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.25■■□□□ 1.47
DDX1Q92499 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
DDX1Q92499 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
DDX1Q92499 SNX5-217ENST00000606557 1087 ntBASIC24.25■■□□□ 1.47
DDX1Q92499 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX1Q92499 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX1Q92499 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
DDX1Q92499 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX1Q92499 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX1Q92499 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX1Q92499 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 AL139246.5-201ENST00000606645 996 ntBASIC24.24■■□□□ 1.47
DDX1Q92499 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX1Q92499 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX1Q92499 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
DDX1Q92499 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
DDX1Q92499 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX1Q92499 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX1Q92499 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
DDX1Q92499 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX1Q92499 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX1Q92499 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.23■■□□□ 1.47
DDX1Q92499 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX1Q92499 ANOS2P-203ENST00000472227 1816 ntBASIC24.23■■□□□ 1.47
DDX1Q92499 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
DDX1Q92499 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.23■■□□□ 1.47
DDX1Q92499 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX1Q92499 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX1Q92499 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
DDX1Q92499 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX1Q92499 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX1Q92499 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX1Q92499 AC021242.3-201ENST00000607598 1377 ntBASIC24.22■■□□□ 1.47
DDX1Q92499 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX1Q92499 KRT125P-201ENST00000546827 989 ntBASIC24.22■■□□□ 1.47
DDX1Q92499 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.22■■□□□ 1.47
DDX1Q92499 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.22■■□□□ 1.47
DDX1Q92499 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.22■■□□□ 1.47
DDX1Q92499 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.22■■□□□ 1.47
DDX1Q92499 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.21■■□□□ 1.47
DDX1Q92499 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
DDX1Q92499 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX1Q92499 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX1Q92499 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX1Q92499 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
DDX1Q92499 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
DDX1Q92499 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX1Q92499 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX1Q92499 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX1Q92499 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX1Q92499 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
DDX1Q92499 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
DDX1Q92499 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX1Q92499 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX1Q92499 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX1Q92499 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.2■■□□□ 1.46
DDX1Q92499 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX1Q92499 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX1Q92499 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX1Q92499 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX1Q92499 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX1Q92499 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX1Q92499 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 AC092068.2-201ENST00000590491 1708 ntBASIC24.18■■□□□ 1.46
DDX1Q92499 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.18■■□□□ 1.46
DDX1Q92499 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX1Q92499 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.18■■□□□ 1.46
DDX1Q92499 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX1Q92499 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX1Q92499 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
DDX1Q92499 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
DDX1Q92499 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX1Q92499 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX1Q92499 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.17■■□□□ 1.46
DDX1Q92499 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX1Q92499 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX1Q92499 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX1Q92499 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms