Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 MIR718-201ENST00000390190 70 ntBASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 AC004854.2-201ENST00000608450 1441 ntBASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 AC005181.1-201ENST00000604782 1256 ntBASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 SNORA78-201ENST00000459373 127 ntBASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 BX088651.1-201ENST00000540551 451 ntBASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SYNE2Q8WXH0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC9.48□□□□□ -0.89
SYNE2Q8WXH0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 AC026396.1-201ENST00000419388 421 ntBASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 KRT18P35-201ENST00000510488 1269 ntBASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 C17orf82-201ENST00000623772 1530 ntBASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 REXO1L12P-201ENST00000622156 912 ntBASIC9.47□□□□□ -0.89
SYNE2Q8WXH0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC9.46□□□□□ -0.89
SYNE2Q8WXH0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SYNE2Q8WXH0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC9.46□□□□□ -0.89
SYNE2Q8WXH0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC9.46□□□□□ -0.89
SYNE2Q8WXH0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC9.46□□□□□ -0.89
SYNE2Q8WXH0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 POU5F1P4-201ENST00000413175 1085 ntBASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 RNA5SP413-201ENST00000516373 109 ntBASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC9.46□□□□□ -0.9
SYNE2Q8WXH0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms