Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
LINC01560Q8TB33 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01560Q8TB33 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 AC233992.3-201ENST00000607491 485 ntBASIC19.74■□□□□ 0.75
LINC01560Q8TB33 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01560Q8TB33 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.73■□□□□ 0.75
LINC01560Q8TB33 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC01560Q8TB33 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 pRNA.6-201ENST00000610482 90 ntBASIC19.72■□□□□ 0.75
LINC01560Q8TB33 pRNA.5-201ENST00000612139 90 ntBASIC19.72■□□□□ 0.75
LINC01560Q8TB33 pRNA.11-201ENST00000618423 90 ntBASIC19.72■□□□□ 0.75
LINC01560Q8TB33 pRNA.13-201ENST00000619112 90 ntBASIC19.72■□□□□ 0.75
LINC01560Q8TB33 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01560Q8TB33 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 BX842568.3-201ENST00000418104 571 ntBASIC19.71■□□□□ 0.75
LINC01560Q8TB33 AL162430.1-201ENST00000480705 870 ntBASIC19.71■□□□□ 0.75
LINC01560Q8TB33 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01560Q8TB33 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01560Q8TB33 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01560Q8TB33 AL161729.1-201ENST00000604104 1402 ntBASIC19.7■□□□□ 0.74
LINC01560Q8TB33 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01560Q8TB33 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01560Q8TB33 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01560Q8TB33 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 ALDH1A3-203ENST00000557963 1670 ntBASIC19.69■□□□□ 0.74
LINC01560Q8TB33 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LINC01560Q8TB33 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 AC126544.1-201ENST00000580842 1059 ntBASIC19.68■□□□□ 0.74
LINC01560Q8TB33 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LINC01560Q8TB33 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 AC135731.1-201ENST00000569415 2548 ntBASIC19.67■□□□□ 0.74
LINC01560Q8TB33 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms