Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RTL9Q8NET4 AC006455.2-201ENST00000429931 906 ntBASIC28.2■■■□□ 2.1
RTL9Q8NET4 AC104564.3-201ENST00000582367 638 ntBASIC28.2■■■□□ 2.1
RTL9Q8NET4 AC136469.2-201ENST00000623944 1028 ntBASIC28.2■■■□□ 2.1
RTL9Q8NET4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
RTL9Q8NET4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RTL9Q8NET4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTL9Q8NET4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.19■■■□□ 2.1
RTL9Q8NET4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.19■■■□□ 2.1
RTL9Q8NET4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.19■■■□□ 2.1
RTL9Q8NET4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.18■■■□□ 2.1
RTL9Q8NET4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.18■■■□□ 2.1
RTL9Q8NET4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.18■■■□□ 2.1
RTL9Q8NET4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTL9Q8NET4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.17■■■□□ 2.1
RTL9Q8NET4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTL9Q8NET4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
RTL9Q8NET4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTL9Q8NET4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.17■■■□□ 2.1
RTL9Q8NET4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTL9Q8NET4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
RTL9Q8NET4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
RTL9Q8NET4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.16■■■□□ 2.1
RTL9Q8NET4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTL9Q8NET4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
RTL9Q8NET4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
RTL9Q8NET4 AC009086.3-201ENST00000623486 1008 ntBASIC28.15■■■□□ 2.1
RTL9Q8NET4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RTL9Q8NET4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.15■■■□□ 2.1
RTL9Q8NET4 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.14■■■□□ 2.1
RTL9Q8NET4 AC027682.1-201ENST00000562846 899 ntBASIC28.14■■■□□ 2.1
RTL9Q8NET4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.1
RTL9Q8NET4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RTL9Q8NET4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTL9Q8NET4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
RTL9Q8NET4 AC142381.3-201ENST00000568208 1670 ntBASIC28.14■■■□□ 2.1
RTL9Q8NET4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.14■■■□□ 2.1
RTL9Q8NET4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTL9Q8NET4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RTL9Q8NET4 RASA4CP-201ENST00000424092 1398 ntBASIC28.13■■■□□ 2.09
RTL9Q8NET4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RTL9Q8NET4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RTL9Q8NET4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RTL9Q8NET4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RTL9Q8NET4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
RTL9Q8NET4 MIR3181-201ENST00000578512 73 ntBASIC28.12■■■□□ 2.09
RTL9Q8NET4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.12■■■□□ 2.09
RTL9Q8NET4 CA15P2-201ENST00000611168 834 ntBASIC28.11■■■□□ 2.09
RTL9Q8NET4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RTL9Q8NET4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RTL9Q8NET4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RTL9Q8NET4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 MIR6821-201ENST00000617625 74 ntBASIC28.11■■■□□ 2.09
RTL9Q8NET4 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.11■■■□□ 2.09
RTL9Q8NET4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.11■■■□□ 2.09
RTL9Q8NET4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RTL9Q8NET4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.1■■■□□ 2.09
RTL9Q8NET4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RTL9Q8NET4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
RTL9Q8NET4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RTL9Q8NET4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.1■■■□□ 2.09
RTL9Q8NET4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.1■■■□□ 2.09
RTL9Q8NET4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.1■■■□□ 2.09
RTL9Q8NET4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.09■■■□□ 2.09
RTL9Q8NET4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.09■■■□□ 2.09
RTL9Q8NET4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
RTL9Q8NET4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTL9Q8NET4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTL9Q8NET4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.09■■■□□ 2.09
RTL9Q8NET4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RTL9Q8NET4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.09■■■□□ 2.09
RTL9Q8NET4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTL9Q8NET4 AC138932.3-201ENST00000567634 1902 ntBASIC28.08■■■□□ 2.09
RTL9Q8NET4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTL9Q8NET4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.08■■■□□ 2.09
RTL9Q8NET4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RTL9Q8NET4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTL9Q8NET4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
RTL9Q8NET4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.07■■■□□ 2.08
RTL9Q8NET4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RTL9Q8NET4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.07■■■□□ 2.08
RTL9Q8NET4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RTL9Q8NET4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.07■■■□□ 2.08
RTL9Q8NET4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.07■■■□□ 2.08
RTL9Q8NET4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RTL9Q8NET4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RTL9Q8NET4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
RTL9Q8NET4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms