Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 LONRF2P2-201ENST00000439212 571 ntBASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PNLDC1Q8NA58 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PNLDC1Q8NA58 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 KRT8P33-201ENST00000508125 1423 ntBASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 MIR4508-201ENST00000584178 70 ntBASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
PNLDC1Q8NA58 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 AC022616.5-201ENST00000518796 181 ntBASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PNLDC1Q8NA58 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 PVT1_1.1-201ENST00000615125 194 ntBASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNLDC1Q8NA58 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
PNLDC1Q8NA58 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PNLDC1Q8NA58 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.64■□□□□ 0.74
PNLDC1Q8NA58 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.64■□□□□ 0.74
PNLDC1Q8NA58 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PNLDC1Q8NA58 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 AL022069.1-201ENST00000568025 1636 ntBASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNLDC1Q8NA58 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNLDC1Q8NA58 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNLDC1Q8NA58 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNLDC1Q8NA58 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms