Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 AL117332.1-201ENST00000622628 974 ntBASIC24.16■■□□□ 1.46
TTC39CQ8N584 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TTC39CQ8N584 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TTC39CQ8N584 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC39CQ8N584 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.15■■□□□ 1.46
TTC39CQ8N584 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC39CQ8N584 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.15■■□□□ 1.46
TTC39CQ8N584 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC39CQ8N584 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC39CQ8N584 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TTC39CQ8N584 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TTC39CQ8N584 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TTC39CQ8N584 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TTC39CQ8N584 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
TTC39CQ8N584 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.14■■□□□ 1.45
TTC39CQ8N584 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TTC39CQ8N584 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TTC39CQ8N584 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.14■■□□□ 1.45
TTC39CQ8N584 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.14■■□□□ 1.45
TTC39CQ8N584 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.14■■□□□ 1.45
TTC39CQ8N584 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.14■■□□□ 1.45
TTC39CQ8N584 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TTC39CQ8N584 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC39CQ8N584 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.13■■□□□ 1.45
TTC39CQ8N584 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC39CQ8N584 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC39CQ8N584 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.13■■□□□ 1.45
TTC39CQ8N584 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TTC39CQ8N584 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TTC39CQ8N584 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TTC39CQ8N584 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.13■■□□□ 1.45
TTC39CQ8N584 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TTC39CQ8N584 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.12■■□□□ 1.45
TTC39CQ8N584 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.12■■□□□ 1.45
TTC39CQ8N584 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.12■■□□□ 1.45
TTC39CQ8N584 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TTC39CQ8N584 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TTC39CQ8N584 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TTC39CQ8N584 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.11■■□□□ 1.45
TTC39CQ8N584 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.11■■□□□ 1.45
TTC39CQ8N584 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TTC39CQ8N584 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TTC39CQ8N584 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TTC39CQ8N584 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TTC39CQ8N584 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC39CQ8N584 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC39CQ8N584 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC39CQ8N584 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.1■■□□□ 1.45
TTC39CQ8N584 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TTC39CQ8N584 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.09■■□□□ 1.45
TTC39CQ8N584 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC39CQ8N584 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TTC39CQ8N584 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
TTC39CQ8N584 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
TTC39CQ8N584 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TTC39CQ8N584 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.08■■□□□ 1.45
TTC39CQ8N584 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
TTC39CQ8N584 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
TTC39CQ8N584 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.07■■□□□ 1.44
TTC39CQ8N584 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.07■■□□□ 1.44
TTC39CQ8N584 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TTC39CQ8N584 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TTC39CQ8N584 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 AC009102.2-201ENST00000606772 1639 ntBASIC24.06■■□□□ 1.44
TTC39CQ8N584 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC39CQ8N584 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC39CQ8N584 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC39CQ8N584 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC39CQ8N584 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TTC39CQ8N584 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TTC39CQ8N584 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.05■■□□□ 1.44
TTC39CQ8N584 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms