Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRTM3Q86VH5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 AL139125.2-201ENST00000623134 1869 ntBASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 AC024257.2-201ENST00000549699 147 ntBASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
LRRTM3Q86VH5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 LINC01124-201ENST00000409786 2117 ntBASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.04■■□□□ 1.44
LRRTM3Q86VH5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 AC135279.3-201ENST00000610945 1311 ntBASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRTM3Q86VH5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 AL031432.3-201ENST00000607698 485 ntBASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRTM3Q86VH5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LRRTM3Q86VH5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRTM3Q86VH5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
LRRTM3Q86VH5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.01■■□□□ 1.43
LRRTM3Q86VH5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRTM3Q86VH5 LINC00543-201ENST00000567234 1845 ntBASIC24■■□□□ 1.43
LRRTM3Q86VH5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRTM3Q86VH5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24■■□□□ 1.43
LRRTM3Q86VH5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24■■□□□ 1.43
LRRTM3Q86VH5 SERBP1P1-201ENST00000396021 1160 ntBASIC24■■□□□ 1.43
LRRTM3Q86VH5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRTM3Q86VH5 DUX4L19-201ENST00000557448 1267 ntBASIC24■■□□□ 1.43
LRRTM3Q86VH5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRTM3Q86VH5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
LRRTM3Q86VH5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SYT6-210ENST00000641643 1587 ntBASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM3Q86VH5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 AC006455.2-201ENST00000429931 906 ntBASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 AC004812.2-201ENST00000611079 2094 ntBASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM3Q86VH5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 SUDS3P1-201ENST00000505831 966 ntBASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.97■■□□□ 1.43
LRRTM3Q86VH5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 AC092171.4-201ENST00000609130 632 ntBASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM3Q86VH5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms