Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS13CQ709C8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS13CQ709C8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
VPS13CQ709C8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS13CQ709C8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS13CQ709C8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS13CQ709C8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS13CQ709C8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS13CQ709C8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS13CQ709C8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS13CQ709C8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VPS13CQ709C8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS13CQ709C8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS13CQ709C8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS13CQ709C8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS13CQ709C8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS13CQ709C8 KRT18P14-201ENST00000534205 1250 ntBASIC19.12■□□□□ 0.65
VPS13CQ709C8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.12■□□□□ 0.65
VPS13CQ709C8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS13CQ709C8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 CDCA4P2-201ENST00000441182 718 ntBASIC19.11■□□□□ 0.65
VPS13CQ709C8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.11■□□□□ 0.65
VPS13CQ709C8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS13CQ709C8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS13CQ709C8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS13CQ709C8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS13CQ709C8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VPS13CQ709C8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS13CQ709C8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS13CQ709C8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.09■□□□□ 0.65
VPS13CQ709C8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS13CQ709C8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS13CQ709C8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS13CQ709C8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS13CQ709C8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VPS13CQ709C8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.08■□□□□ 0.65
VPS13CQ709C8 KRT18P61-201ENST00000585825 1298 ntBASIC19.08■□□□□ 0.65
VPS13CQ709C8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.08■□□□□ 0.65
VPS13CQ709C8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS13CQ709C8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS13CQ709C8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS13CQ709C8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS13CQ709C8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 AC104771.1-201ENST00000603335 964 ntBASIC19.07■□□□□ 0.64
VPS13CQ709C8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS13CQ709C8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 CCDC92B-201ENST00000575506 885 ntBASIC19.07■□□□□ 0.64
VPS13CQ709C8 AL121749.1-202ENST00000609313 2153 ntBASIC19.07■□□□□ 0.64
VPS13CQ709C8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS13CQ709C8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS13CQ709C8 AC006015.1-201ENST00000429970 570 ntBASIC19.07■□□□□ 0.64
VPS13CQ709C8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS13CQ709C8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS13CQ709C8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VPS13CQ709C8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS13CQ709C8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS13CQ709C8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS13CQ709C8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VPS13CQ709C8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms