Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA1Q6ZS62 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COLCA1Q6ZS62 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COLCA1Q6ZS62 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COLCA1Q6ZS62 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COLCA1Q6ZS62 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.58■□□□□ 0.73
COLCA1Q6ZS62 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.58■□□□□ 0.72
COLCA1Q6ZS62 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 AL035685.1-201ENST00000636663 812 ntBASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.57■□□□□ 0.72
COLCA1Q6ZS62 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 AC005703.6-201ENST00000623265 1329 ntBASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA1Q6ZS62 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
COLCA1Q6ZS62 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA1Q6ZS62 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.53■□□□□ 0.72
COLCA1Q6ZS62 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms