Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
LINC00575Q6W349 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LINC00575Q6W349 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00575Q6W349 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 AL137060.1-201ENST00000618151 2648 ntBASIC14.36□□□□□ -0.11
LINC00575Q6W349 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00575Q6W349 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC00575Q6W349 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00575Q6W349 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00575Q6W349 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00575Q6W349 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00575Q6W349 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00575Q6W349 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00575Q6W349 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00575Q6W349 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00575Q6W349 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00575Q6W349 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
LINC00575Q6W349 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00575Q6W349 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00575Q6W349 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 MIR3960-201ENST00000583311 91 ntBASIC14.32□□□□□ -0.12
LINC00575Q6W349 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00575Q6W349 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00575Q6W349 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00575Q6W349 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00575Q6W349 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00575Q6W349 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00575Q6W349 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00575Q6W349 AL161729.1-201ENST00000604104 1402 ntBASIC14.31□□□□□ -0.12
LINC00575Q6W349 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms