Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 AC120024.1-201ENST00000562672 995 ntBASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM65Q6PJ69 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM65Q6PJ69 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM65Q6PJ69 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
TRIM65Q6PJ69 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TRIM65Q6PJ69 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM65Q6PJ69 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM65Q6PJ69 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
TRIM65Q6PJ69 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 AL161729.1-201ENST00000604104 1402 ntBASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM65Q6PJ69 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 KRT18P24-201ENST00000344739 1156 ntBASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
TRIM65Q6PJ69 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM65Q6PJ69 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.85■■□□□ 1.57
TRIM65Q6PJ69 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM65Q6PJ69 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.85■■□□□ 1.57
TRIM65Q6PJ69 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.85■■□□□ 1.57
TRIM65Q6PJ69 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 MIR4508-201ENST00000584178 70 ntBASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
TRIM65Q6PJ69 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 AC131274.2-201ENST00000580697 1507 ntBASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 THA1P-201ENST00000590384 1145 ntBASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM65Q6PJ69 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM65Q6PJ69 AL022069.1-201ENST00000568025 1636 ntBASIC24.83■■□□□ 1.56
TRIM65Q6PJ69 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 AC103834.1-201ENST00000520383 144 ntBASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 MIR4281-201ENST00000580852 62 ntBASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 C1orf229-201ENST00000623686 2258 ntBASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM65Q6PJ69 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM65Q6PJ69 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM65Q6PJ69 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM65Q6PJ69 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM65Q6PJ69 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms