Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.33■□□□□ 0.69
ARFGEF3Q5TH69 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ARFGEF3Q5TH69 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ARFGEF3Q5TH69 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ARFGEF3Q5TH69 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ARFGEF3Q5TH69 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARFGEF3Q5TH69 SERBP1P1-201ENST00000396021 1160 ntBASIC19.33■□□□□ 0.68
ARFGEF3Q5TH69 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.33■□□□□ 0.68
ARFGEF3Q5TH69 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.33■□□□□ 0.68
ARFGEF3Q5TH69 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 AC142381.2-201ENST00000566120 298 ntBASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 AP001330.3-201ENST00000520123 633 ntBASIC19.32■□□□□ 0.68
ARFGEF3Q5TH69 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARFGEF3Q5TH69 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 SRD5A1P1-201ENST00000442297 786 ntBASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 AC099791.2-201ENST00000605725 427 ntBASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 AL136162.1-201ENST00000607711 1078 ntBASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 AC011298.3-201ENST00000615796 283 ntBASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARFGEF3Q5TH69 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 AC006455.2-201ENST00000429931 906 ntBASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARFGEF3Q5TH69 AL161729.1-201ENST00000604104 1402 ntBASIC19.28■□□□□ 0.68
ARFGEF3Q5TH69 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 AC026271.2-201ENST00000428091 497 ntBASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ARFGEF3Q5TH69 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
ARFGEF3Q5TH69 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARFGEF3Q5TH69 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARFGEF3Q5TH69 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARFGEF3Q5TH69 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 AL138724.1-201ENST00000606771 1088 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 AL355001.2-201ENST00000620617 1191 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 AC241377.3-202ENST00000626088 1088 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 AC241585.3-202ENST00000628937 1088 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 AC245100.8-202ENST00000629247 1058 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 ALDH1A3-203ENST00000557963 1670 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 MIR939-201ENST00000401314 82 ntBASIC19.25■□□□□ 0.67
ARFGEF3Q5TH69 RARRES2P6-201ENST00000567333 442 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms