Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 KRT18P61-201ENST00000585825 1298 ntBASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.68■■□□□ 1.54
LRIT3Q3SXY7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 AC142086.2-201ENST00000569753 217 ntBASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 ABCB10P1-201ENST00000614297 2181 ntBASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LRIT3Q3SXY7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 pRNA.6-201ENST00000610482 90 ntBASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 pRNA.5-201ENST00000612139 90 ntBASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 pRNA.11-201ENST00000618423 90 ntBASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 pRNA.13-201ENST00000619112 90 ntBASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 AP004609.3-201ENST00000610705 1884 ntBASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.66■■□□□ 1.54
LRIT3Q3SXY7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 GPX1P1-201ENST00000388829 606 ntBASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.65■■□□□ 1.54
LRIT3Q3SXY7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
LRIT3Q3SXY7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRIT3Q3SXY7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.64■■□□□ 1.54
LRIT3Q3SXY7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
LRIT3Q3SXY7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
LRIT3Q3SXY7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRIT3Q3SXY7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.63■■□□□ 1.53
LRIT3Q3SXY7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRIT3Q3SXY7 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.63■■□□□ 1.53
LRIT3Q3SXY7 KRT18P6-201ENST00000555540 1265 ntBASIC24.63■■□□□ 1.53
LRIT3Q3SXY7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.63■■□□□ 1.53
LRIT3Q3SXY7 LINC01003-201ENST00000564834 1764 ntBASIC24.62■■□□□ 1.53
LRIT3Q3SXY7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.62■■□□□ 1.53
LRIT3Q3SXY7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.62■■□□□ 1.53
LRIT3Q3SXY7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRIT3Q3SXY7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
LRIT3Q3SXY7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRIT3Q3SXY7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.6■■□□□ 1.53
LRIT3Q3SXY7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 AP005435.1-201ENST00000529293 1178 ntBASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 AC131274.2-201ENST00000580697 1507 ntBASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRIT3Q3SXY7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.58■■□□□ 1.53
LRIT3Q3SXY7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms