Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YNL054W-AYNL054W-A 1323 nt5.58□□□□□ -1.52
SSL1Q04673 YOL103W-AYOL103W-A 1323 nt5.58□□□□□ -1.52
SSL1Q04673 YPL257W-AYPL257W-A 1323 nt5.58□□□□□ -1.52
SSL1Q04673 YPR137C-AYPR137C-A 1323 nt5.58□□□□□ -1.52
SSL1Q04673 YPR158C-CYPR158C-C 1323 nt5.58□□□□□ -1.52
SSL1Q04673 NUP42YDR192C 1293 nt5.58□□□□□ -1.52
SSL1Q04673 BMH1YER177W 804 nt5.58□□□□□ -1.52
SSL1Q04673 YKL091CYKL091C 933 nt5.58□□□□□ -1.52
SSL1Q04673 VPS1YKR001C 2115 nt5.58□□□□□ -1.52
SSL1Q04673 YLR042CYLR042C 486 nt5.58□□□□□ -1.52
SSL1Q04673 YLR049CYLR049C 1287 nt5.58□□□□□ -1.52
SSL1Q04673 SMD3YLR147C 306 nt5.58□□□□□ -1.52
SSL1Q04673 PRM9YAR031W 897 nt5.58□□□□□ -1.52
SSL1Q04673 YLR271WYLR271W 825 nt5.58□□□□□ -1.52
SSL1Q04673 YBL062WYBL062W 381 nt5.58□□□□□ -1.52
SSL1Q04673 GLO4YOR040W 858 nt5.58□□□□□ -1.52
SSL1Q04673 ERI1YPL096C-A 207 nt5.58□□□□□ -1.52
SSL1Q04673 MET7YOR241W 1647 nt5.58□□□□□ -1.52
SSL1Q04673 RGD1YBR260C 2001 nt5.58□□□□□ -1.52
SSL1Q04673 NSI1YDR026C 1713 nt5.57□□□□□ -1.52
SSL1Q04673 SHE9YDR393W 1371 nt5.57□□□□□ -1.52
SSL1Q04673 NUF2YOL069W 1356 nt5.57□□□□□ -1.52
SSL1Q04673 VNX1YNL321W 2727 nt5.57□□□□□ -1.52
SSL1Q04673 SAD1YFR005C 1347 nt5.57□□□□□ -1.52
SSL1Q04673 YDL057WYDL057W 987 nt5.57□□□□□ -1.52
SSL1Q04673 YDL183CYDL183C 963 nt5.57□□□□□ -1.52
SSL1Q04673 YGR219WYGR219W 342 nt5.57□□□□□ -1.52
SSL1Q04673 CIA2YHR122W 696 nt5.57□□□□□ -1.52
SSL1Q04673 PAN6YIL145C 930 nt5.57□□□□□ -1.52
SSL1Q04673 RPC25YKL144C 639 nt5.57□□□□□ -1.52
SSL1Q04673 YME1YPR024W 2244 nt5.56□□□□□ -1.52
SSL1Q04673 YMR1YJR110W 2067 nt5.56□□□□□ -1.52
SSL1Q04673 RRP45YDR280W 918 nt5.56□□□□□ -1.52
SSL1Q04673 YFR052C-AYFR052C-A 306 nt5.56□□□□□ -1.52
SSL1Q04673 PEX14YGL153W 1026 nt5.56□□□□□ -1.52
SSL1Q04673 YHB1YGR234W 1200 nt5.56□□□□□ -1.52
SSL1Q04673 NTR2YKR022C 969 nt5.56□□□□□ -1.52
SSL1Q04673 GPN3YLR243W 819 nt5.56□□□□□ -1.52
SSL1Q04673 STB3YDR169C 1542 nt5.56□□□□□ -1.52
SSL1Q04673 VAN1YML115C 1608 nt5.56□□□□□ -1.52
SSL1Q04673 ATP1YBL099W 1638 nt5.56□□□□□ -1.52
SSL1Q04673 GUA1YMR217W 1578 nt5.55□□□□□ -1.52
SSL1Q04673 YFR034W-AYFR034W-A 288 nt5.55□□□□□ -1.52
SSL1Q04673 PEF1YGR058W 1008 nt5.55□□□□□ -1.52
SSL1Q04673 VMA16YHR026W 642 nt5.55□□□□□ -1.52
SSL1Q04673 CUP1-1YHR053C 186 nt5.55□□□□□ -1.52
SSL1Q04673 CUP1-2YHR055C 186 nt5.55□□□□□ -1.52
SSL1Q04673 SIC1YLR079W 855 nt5.55□□□□□ -1.52
SSL1Q04673 YLR202CYLR202C 327 nt5.55□□□□□ -1.52
SSL1Q04673 RPS10BYMR230W 318 nt5.55□□□□□ -1.52
SSL1Q04673 CAR1YPL111W 1002 nt5.55□□□□□ -1.52
SSL1Q04673 MRPL37YBR268W 318 nt5.55□□□□□ -1.52
SSL1Q04673 PPR1YLR014C 2715 nt5.55□□□□□ -1.52
SSL1Q04673 YFL042CYFL042C 2025 nt5.55□□□□□ -1.52
SSL1Q04673 SIR1YKR101W 1965 nt5.55□□□□□ -1.52
SSL1Q04673 RNY1YPL123C 1305 nt5.54□□□□□ -1.52
SSL1Q04673 SMF2YHR050W 1650 nt5.54□□□□□ -1.52
SSL1Q04673 FUM1YPL262W 1467 nt5.54□□□□□ -1.52
SSL1Q04673 SHM1YBR263W 1473 nt5.54□□□□□ -1.52
SSL1Q04673 ECM3YOR092W 1842 nt5.54□□□□□ -1.52
SSL1Q04673 YDR154CYDR154C 351 nt5.54□□□□□ -1.52
SSL1Q04673 LST7YGR057C 729 nt5.54□□□□□ -1.52
SSL1Q04673 YGR270C-AYGR270C-A 219 nt5.54□□□□□ -1.52
SSL1Q04673 YIL152WYIL152W 708 nt5.54□□□□□ -1.52
SSL1Q04673 POP8YBL018C 402 nt5.54□□□□□ -1.52
SSL1Q04673 YML101C-AYML101C-A 318 nt5.54□□□□□ -1.52
SSL1Q04673 COS3YML132W 1140 nt5.54□□□□□ -1.52
SSL1Q04673 IDI1YPL117C 867 nt5.54□□□□□ -1.52
SSL1Q04673 SUE1YPR151C 621 nt5.54□□□□□ -1.52
SSL1Q04673 ATG14YBR128C 1035 nt5.54□□□□□ -1.52
SSL1Q04673 COS2YBR302C 1140 nt5.54□□□□□ -1.52
SSL1Q04673 CLB1YGR108W 1416 nt5.54□□□□□ -1.52
SSL1Q04673 QDR3YBR043C 2070 nt5.54□□□□□ -1.52
SSL1Q04673 MID1YNL291C 1647 nt5.53□□□□□ -1.52
SSL1Q04673 PRT1YOR361C 2292 nt5.53□□□□□ -1.52
SSL1Q04673 YDL119CYDL119C 924 nt5.53□□□□□ -1.52
SSL1Q04673 CPR1YDR155C 489 nt5.53□□□□□ -1.52
SSL1Q04673 PLP1YDR183W 693 nt5.53□□□□□ -1.52
SSL1Q04673 IPK1YDR315C 846 nt5.53□□□□□ -1.52
SSL1Q04673 CAD1YDR423C 1230 nt5.53□□□□□ -1.52
SSL1Q04673 SNZ3YFL059W 897 nt5.53□□□□□ -1.52
SSL1Q04673 DCV1YFR012W 609 nt5.53□□□□□ -1.52
SSL1Q04673 CBP4YGR174C 513 nt5.53□□□□□ -1.52
SSL1Q04673 TIS11YLR136C 858 nt5.53□□□□□ -1.52
SSL1Q04673 YLR156WYLR156W 345 nt5.53□□□□□ -1.52
SSL1Q04673 YLR157W-DYLR157W-D 213 nt5.53□□□□□ -1.52
SSL1Q04673 YLR159WYLR159W 345 nt5.53□□□□□ -1.52
SSL1Q04673 YLR161WYLR161W 345 nt5.53□□□□□ -1.52
SSL1Q04673 SSP120YLR250W 705 nt5.53□□□□□ -1.52
SSL1Q04673 YLR374CYLR374C 390 nt5.53□□□□□ -1.52
SSL1Q04673 LST8YNL006W 912 nt5.53□□□□□ -1.52
SSL1Q04673 YIF1YNL263C 945 nt5.53□□□□□ -1.52
SSL1Q04673 SNZ2YNL333W 897 nt5.53□□□□□ -1.52
SSL1Q04673 NHP6BYBR089C-A 300 nt5.53□□□□□ -1.52
SSL1Q04673 YLR108CYLR108C 1458 nt5.52□□□□□ -1.53
SSL1Q04673 SRO9YCL037C 1305 nt5.52□□□□□ -1.53
SSL1Q04673 ASP1YDR321W 1146 nt5.52□□□□□ -1.53
SSL1Q04673 MRPS35YGR165W 1038 nt5.52□□□□□ -1.53
SSL1Q04673 GTT1YIR038C 705 nt5.52□□□□□ -1.53
SSL1Q04673 YJL032WYJL032W 315 nt5.52□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms