Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB5BP61020 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RAB5BP61020 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RAB5BP61020 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB5BP61020 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB5BP61020 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.83■□□□□ 0.45
RAB5BP61020 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB5BP61020 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB5BP61020 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB5BP61020 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB5BP61020 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RAB5BP61020 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RAB5BP61020 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RAB5BP61020 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB5BP61020 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB5BP61020 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB5BP61020 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RAB5BP61020 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB5BP61020 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAB5BP61020 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB5BP61020 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB5BP61020 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB5BP61020 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB5BP61020 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB5BP61020 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB5BP61020 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB5BP61020 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB5BP61020 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAB5BP61020 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB5BP61020 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB5BP61020 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB5BP61020 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB5BP61020 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB5BP61020 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB5BP61020 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB5BP61020 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB5BP61020 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB5BP61020 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB5BP61020 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB5BP61020 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB5BP61020 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RAB5BP61020 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RAB5BP61020 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAB5BP61020 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RAB5BP61020 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAB5BP61020 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB5BP61020 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB5BP61020 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB5BP61020 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB5BP61020 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB5BP61020 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB5BP61020 AC006077.2-201ENST00000623591 457 ntBASIC17.77■□□□□ 0.44
RAB5BP61020 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RAB5BP61020 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB5BP61020 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.77■□□□□ 0.43
RAB5BP61020 AC242852.2-201ENST00000615738 1807 ntBASIC17.77■□□□□ 0.43
RAB5BP61020 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms