Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YML131WYML131W 1098 nt6.75□□□□□ -1.33
CAF120P53836 YOR114WYOR114W 885 nt6.75□□□□□ -1.33
CAF120P53836 TDP1YBR223C 1635 nt6.75□□□□□ -1.33
CAF120P53836 YCR022CYCR022C 345 nt6.74□□□□□ -1.33
CAF120P53836 YER097WYER097W 330 nt6.74□□□□□ -1.33
CAF120P53836 CYC1YJR048W 330 nt6.74□□□□□ -1.33
CAF120P53836 MID2YLR332W 1131 nt6.74□□□□□ -1.33
CAF120P53836 ADD37YMR184W 597 nt6.74□□□□□ -1.33
CAF120P53836 COS1YNL336W 1146 nt6.74□□□□□ -1.33
CAF120P53836 YOL118CYOL118C 309 nt6.74□□□□□ -1.33
CAF120P53836 PRM3YPL192C 402 nt6.74□□□□□ -1.33
CAF120P53836 TAE1YBR261C 699 nt6.74□□□□□ -1.33
CAF120P53836 NUP49YGL172W 1419 nt6.74□□□□□ -1.33
CAF120P53836 ERG9YHR190W 1335 nt6.74□□□□□ -1.33
CAF120P53836 CLN1YMR199W 1641 nt6.73□□□□□ -1.33
CAF120P53836 PET112YBL080C 1626 nt6.73□□□□□ -1.33
CAF120P53836 CTA1YDR256C 1548 nt6.73□□□□□ -1.33
CAF120P53836 ATG18YFR021W 1503 nt6.73□□□□□ -1.33
CAF120P53836 YCR015CYCR015C 954 nt6.73□□□□□ -1.33
CAF120P53836 RAD55YDR076W 1221 nt6.73□□□□□ -1.33
CAF120P53836 CDC73YLR418C 1182 nt6.73□□□□□ -1.33
CAF120P53836 UIP4YPL186C 915 nt6.73□□□□□ -1.33
CAF120P53836 SNT309YPR101W 528 nt6.73□□□□□ -1.33
CAF120P53836 POL30YBR088C 777 nt6.73□□□□□ -1.33
CAF120P53836 ATG14YBR128C 1035 nt6.73□□□□□ -1.33
CAF120P53836 IRC5YFR038W 2562 nt6.72□□□□□ -1.33
CAF120P53836 STB3YDR169C 1542 nt6.72□□□□□ -1.33
CAF120P53836 RPF1YHR088W 888 nt6.72□□□□□ -1.33
CAF120P53836 TPK1YJL164C 1194 nt6.72□□□□□ -1.33
CAF120P53836 YNK1YKL067W 462 nt6.72□□□□□ -1.33
CAF120P53836 TEX1YNL253W 1269 nt6.72□□□□□ -1.33
CAF120P53836 WRS1YOL097C 1299 nt6.72□□□□□ -1.33
CAF120P53836 SGT1YOR057W 1188 nt6.72□□□□□ -1.33
CAF120P53836 STP4YDL048C 1473 nt6.72□□□□□ -1.33
CAF120P53836 MSG5YNL053W 1470 nt6.72□□□□□ -1.33
CAF120P53836 SGE1YPR198W 1632 nt6.72□□□□□ -1.33
CAF120P53836 DLD1YDL174C 1764 nt6.72□□□□□ -1.33
CAF120P53836 NOC4YPR144C 1659 nt6.71□□□□□ -1.33
CAF120P53836 LPL1YOR059C 1353 nt6.71□□□□□ -1.33
CAF120P53836 YDR187CYDR187C 519 nt6.71□□□□□ -1.34
CAF120P53836 HPT1YDR399W 666 nt6.71□□□□□ -1.34
CAF120P53836 HHY1YEL059W 309 nt6.71□□□□□ -1.34
CAF120P53836 MXR1YER042W 555 nt6.71□□□□□ -1.34
CAF120P53836 YGR068W-AYGR068W-A 96 nt6.71□□□□□ -1.34
CAF120P53836 YKL183C-AYKL183C-A 213 nt6.71□□□□□ -1.34
CAF120P53836 YNL097W-AYNL097W-A 156 nt6.71□□□□□ -1.34
CAF120P53836 YOL099CYOL099C 492 nt6.71□□□□□ -1.34
CAF120P53836 RPS28AYOR167C 204 nt6.71□□□□□ -1.34
CAF120P53836 YBR113WYBR113W 483 nt6.71□□□□□ -1.34
CAF120P53836 WHI2YOR043W 1461 nt6.71□□□□□ -1.34
CAF120P53836 ECM30YLR436C 3825 nt6.71□□□□□ -1.34
CAF120P53836 LTV1YKL143W 1392 nt6.7□□□□□ -1.34
CAF120P53836 DON1YDR273W 1098 nt6.7□□□□□ -1.34
CAF120P53836 MTR3YGR158C 753 nt6.7□□□□□ -1.34
CAF120P53836 HOT13YKL084W 351 nt6.7□□□□□ -1.34
CAF120P53836 JLP1YLL057C 1239 nt6.7□□□□□ -1.34
CAF120P53836 RLP24YLR009W 600 nt6.7□□□□□ -1.34
CAF120P53836 SEN34YAR008W 828 nt6.7□□□□□ -1.34
CAF120P53836 NNT1YLR285W 786 nt6.7□□□□□ -1.34
CAF120P53836 GCD7YLR291C 1146 nt6.7□□□□□ -1.34
CAF120P53836 YMR295CYMR295C 594 nt6.7□□□□□ -1.34
CAF120P53836 IRC11YOR013W 471 nt6.7□□□□□ -1.34
CAF120P53836 YOR029WYOR029W 336 nt6.7□□□□□ -1.34
CAF120P53836 AMN1YBR158W 1650 nt6.7□□□□□ -1.34
CAF120P53836 BPL1YDL141W 2073 nt6.7□□□□□ -1.34
CAF120P53836 YBL005W-AYBL005W-A 1323 nt6.7□□□□□ -1.34
CAF120P53836 YMR046CYMR046C 1323 nt6.7□□□□□ -1.34
CAF120P53836 ESA1YOR244W 1338 nt6.7□□□□□ -1.34
CAF120P53836 ZWF1YNL241C 1518 nt6.7□□□□□ -1.34
CAF120P53836 KRE29YER038C 1395 nt6.69□□□□□ -1.34
CAF120P53836 VPS72YDR485C 2388 nt6.69□□□□□ -1.34
CAF120P53836 MCH2YKL221W 1422 nt6.69□□□□□ -1.34
CAF120P53836 PTC1YDL006W 846 nt6.69□□□□□ -1.34
CAF120P53836 SDC1YDR469W 528 nt6.69□□□□□ -1.34
CAF120P53836 VMA3YEL027W 483 nt6.69□□□□□ -1.34
CAF120P53836 YFR009W-AYFR009W-A 258 nt6.69□□□□□ -1.34
CAF120P53836 YAL045CYAL045C 309 nt6.69□□□□□ -1.34
CAF120P53836 SIC1YLR079W 855 nt6.69□□□□□ -1.34
CAF120P53836 YBL070CYBL070C 321 nt6.69□□□□□ -1.34
CAF120P53836 VHS1YDR247W 1386 nt6.69□□□□□ -1.34
CAF120P53836 CDC40YDR364C 1368 nt6.69□□□□□ -1.34
CAF120P53836 GDI1YER136W 1356 nt6.69□□□□□ -1.34
CAF120P53836 ORC5YNL261W 1440 nt6.68□□□□□ -1.34
CAF120P53836 YHL012WYHL012W 1482 nt6.68□□□□□ -1.34
CAF120P53836 SPS2YDR522C 1509 nt6.68□□□□□ -1.34
CAF120P53836 HLR1YDR528W 1272 nt6.68□□□□□ -1.34
CAF120P53836 Q0143Q0143 153 nt6.68□□□□□ -1.34
CAF120P53836 YGR204C-AYGR204C-A 114 nt6.68□□□□□ -1.34
CAF120P53836 TTI2YJR136C 1266 nt6.68□□□□□ -1.34
CAF120P53836 YLL056CYLL056C 897 nt6.68□□□□□ -1.34
CAF120P53836 ZRT2YLR130C 1269 nt6.68□□□□□ -1.34
CAF120P53836 YLR339CYLR339C 552 nt6.68□□□□□ -1.34
CAF120P53836 YML084WYML084W 309 nt6.68□□□□□ -1.34
CAF120P53836 GPI12YMR281W 915 nt6.68□□□□□ -1.34
CAF120P53836 YNL203CYNL203C 612 nt6.68□□□□□ -1.34
CAF120P53836 MRPL10YNL284C 969 nt6.68□□□□□ -1.34
CAF120P53836 MPD1YOR288C 957 nt6.68□□□□□ -1.34
CAF120P53836 YPL038W-AYPL038W-A 192 nt6.68□□□□□ -1.34
CAF120P53836 YNL247WYNL247W 2304 nt6.68□□□□□ -1.34
CAF120P53836 CEM1YER061C 1329 nt6.68□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 35.1 ms