Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN2P51788 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN2P51788 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
CLCN2P51788 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CLCN2P51788 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN2P51788 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.85■■□□□ 1.09
CLCN2P51788 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCN2P51788 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CLCN2P51788 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
CLCN2P51788 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.84■■□□□ 1.09
CLCN2P51788 ABCB10P4-201ENST00000566803 2184 ntBASIC21.84■■□□□ 1.09
CLCN2P51788 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCN2P51788 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCN2P51788 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CLCN2P51788 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCN2P51788 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN2P51788 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN2P51788 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN2P51788 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN2P51788 Z92544.1-202ENST00000571933 1220 ntBASIC21.83■■□□□ 1.09
CLCN2P51788 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN2P51788 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.83■■□□□ 1.08
CLCN2P51788 LINC00526-201ENST00000581067 1875 ntBASIC21.83■■□□□ 1.08
CLCN2P51788 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.83■■□□□ 1.08
CLCN2P51788 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN2P51788 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN2P51788 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CLCN2P51788 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLCN2P51788 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN2P51788 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 BX664725.1-201ENST00000438252 379 ntBASIC21.82■■□□□ 1.08
CLCN2P51788 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CLCN2P51788 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN2P51788 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN2P51788 C1orf229-201ENST00000623686 2258 ntBASIC21.82■■□□□ 1.08
CLCN2P51788 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN2P51788 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCN2P51788 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN2P51788 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN2P51788 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.81■■□□□ 1.08
CLCN2P51788 MIR4281-201ENST00000580852 62 ntBASIC21.81■■□□□ 1.08
CLCN2P51788 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.81■■□□□ 1.08
CLCN2P51788 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.8■■□□□ 1.08
CLCN2P51788 AC239859.2-201ENST00000444165 318 ntBASIC21.8■■□□□ 1.08
CLCN2P51788 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCN2P51788 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CLCN2P51788 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCN2P51788 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN2P51788 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN2P51788 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN2P51788 KRT125P-201ENST00000546827 989 ntBASIC21.79■■□□□ 1.08
CLCN2P51788 AC137630.3-201ENST00000607245 391 ntBASIC21.79■■□□□ 1.08
CLCN2P51788 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN2P51788 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN2P51788 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN2P51788 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLCN2P51788 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.78■■□□□ 1.08
CLCN2P51788 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN2P51788 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN2P51788 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN2P51788 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCN2P51788 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.78■■□□□ 1.08
CLCN2P51788 AC090877.2-201ENST00000558441 1738 ntBASIC21.77■■□□□ 1.08
CLCN2P51788 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN2P51788 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCN2P51788 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN2P51788 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN2P51788 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN2P51788 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCN2P51788 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms