Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A3P43003 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A3P43003 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A3P43003 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A3P43003 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A3P43003 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A3P43003 RARRES2P1-201ENST00000474487 481 ntBASIC20.79■□□□□ 0.92
SLC1A3P43003 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SLC1A3P43003 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SLC1A3P43003 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC1A3P43003 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC1A3P43003 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC1A3P43003 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A3P43003 ALDH1A3-203ENST00000557963 1670 ntBASIC20.78■□□□□ 0.92
SLC1A3P43003 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC1A3P43003 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A3P43003 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC1A3P43003 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A3P43003 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A3P43003 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A3P43003 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A3P43003 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC1A3P43003 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SLC1A3P43003 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC1A3P43003 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A3P43003 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC1A3P43003 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC1A3P43003 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SLC1A3P43003 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A3P43003 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A3P43003 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC1A3P43003 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC1A3P43003 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC1A3P43003 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A3P43003 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC1A3P43003 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC1A3P43003 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A3P43003 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SLC1A3P43003 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC1A3P43003 BX664725.1-201ENST00000438252 379 ntBASIC20.75■□□□□ 0.91
SLC1A3P43003 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A3P43003 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC1A3P43003 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A3P43003 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC1A3P43003 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC1A3P43003 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 AC021242.3-201ENST00000607598 1377 ntBASIC20.74■□□□□ 0.91
SLC1A3P43003 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC1A3P43003 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC1A3P43003 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC1A3P43003 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC1A3P43003 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC1A3P43003 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC1A3P43003 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC1A3P43003 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SLC1A3P43003 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC1A3P43003 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLC1A3P43003 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC1A3P43003 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 SNX5-217ENST00000606557 1087 ntBASIC20.73■□□□□ 0.91
SLC1A3P43003 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC1A3P43003 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SLC1A3P43003 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A3P43003 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A3P43003 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms