Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 SLC25A24-204ENST00000569674 2357 ntBASIC20.28■□□□□ 0.84
SOX6P35712 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SOX6P35712 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SOX6P35712 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.27■□□□□ 0.84
SOX6P35712 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SOX6P35712 AL137060.1-201ENST00000618151 2648 ntBASIC20.27■□□□□ 0.84
SOX6P35712 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOX6P35712 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX6P35712 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX6P35712 MIR219A2-201ENST00000608502 1504 ntBASIC20.27■□□□□ 0.83
SOX6P35712 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOX6P35712 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SOX6P35712 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.26■□□□□ 0.83
SOX6P35712 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX6P35712 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
SOX6P35712 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOX6P35712 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.26■□□□□ 0.83
SOX6P35712 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX6P35712 AC242852.2-201ENST00000615738 1807 ntBASIC20.25■□□□□ 0.83
SOX6P35712 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX6P35712 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L13-201ENST00000554103 1267 ntBASIC20.25■□□□□ 0.83
SOX6P35712 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L15-201ENST00000611059 1267 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L23-201ENST00000615195 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L24-201ENST00000617576 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L22-201ENST00000618238 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L20-201ENST00000619712 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L21-201ENST00000622058 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L10-201ENST00000622460 1267 ntBASIC20.25■□□□□ 0.83
SOX6P35712 DUX4L25-201ENST00000624915 1269 ntBASIC20.25■□□□□ 0.83
SOX6P35712 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SOX6P35712 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOX6P35712 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOX6P35712 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.25■□□□□ 0.83
SOX6P35712 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SOX6P35712 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SOX6P35712 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SOX6P35712 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SOX6P35712 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SOX6P35712 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOX6P35712 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.23■□□□□ 0.83
SOX6P35712 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SOX6P35712 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SOX6P35712 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX6P35712 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SOX6P35712 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.22■□□□□ 0.83
SOX6P35712 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX6P35712 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.22■□□□□ 0.83
SOX6P35712 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX6P35712 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX6P35712 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SOX6P35712 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SOX6P35712 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 AC008813.1-201ENST00000536597 885 ntBASIC20.21■□□□□ 0.83
SOX6P35712 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms