Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RXRBP28702 DRD5P2-201ENST00000421395 2012 ntBASIC30.48■■■□□ 2.47
RXRBP28702 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.48■■■□□ 2.47
RXRBP28702 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC30.48■■■□□ 2.47
RXRBP28702 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.48■■■□□ 2.47
RXRBP28702 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
RXRBP28702 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RXRBP28702 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.47■■■□□ 2.47
RXRBP28702 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.47■■■□□ 2.47
RXRBP28702 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RXRBP28702 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
RXRBP28702 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RXRBP28702 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.46■■■□□ 2.47
RXRBP28702 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.46■■■□□ 2.47
RXRBP28702 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RXRBP28702 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RXRBP28702 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.45■■■□□ 2.47
RXRBP28702 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RXRBP28702 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.45■■■□□ 2.47
RXRBP28702 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
RXRBP28702 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
RXRBP28702 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
RXRBP28702 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.44■■■□□ 2.46
RXRBP28702 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RXRBP28702 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.44■■■□□ 2.46
RXRBP28702 AC087239.1-201ENST00000622671 572 ntBASIC30.44■■■□□ 2.46
RXRBP28702 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RXRBP28702 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.44■■■□□ 2.46
RXRBP28702 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.43■■■□□ 2.46
RXRBP28702 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RXRBP28702 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RXRBP28702 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.43■■■□□ 2.46
RXRBP28702 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
RXRBP28702 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RXRBP28702 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC30.43■■■□□ 2.46
RXRBP28702 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RXRBP28702 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RXRBP28702 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.42■■■□□ 2.46
RXRBP28702 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.42■■■□□ 2.46
RXRBP28702 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
RXRBP28702 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RXRBP28702 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RXRBP28702 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RXRBP28702 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.41■■■□□ 2.46
RXRBP28702 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC30.4■■■□□ 2.46
RXRBP28702 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
RXRBP28702 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
RXRBP28702 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
RXRBP28702 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC30.4■■■□□ 2.46
RXRBP28702 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RXRBP28702 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RXRBP28702 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.39■■■□□ 2.46
RXRBP28702 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.39■■■□□ 2.46
RXRBP28702 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC30.39■■■□□ 2.46
RXRBP28702 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC30.39■■■□□ 2.46
RXRBP28702 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.39■■■□□ 2.46
RXRBP28702 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
RXRBP28702 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
RXRBP28702 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
RXRBP28702 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
RXRBP28702 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.39■■■□□ 2.45
RXRBP28702 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.38■■■□□ 2.45
RXRBP28702 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
RXRBP28702 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.37■■■□□ 2.45
RXRBP28702 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RXRBP28702 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.37■■■□□ 2.45
RXRBP28702 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RXRBP28702 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RXRBP28702 AP004607.4-201ENST00000530158 1459 ntBASIC30.37■■■□□ 2.45
RXRBP28702 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.37■■■□□ 2.45
RXRBP28702 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.36■■■□□ 2.45
RXRBP28702 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.36■■■□□ 2.45
RXRBP28702 AC011767.1-201ENST00000617410 1153 ntBASIC30.36■■■□□ 2.45
RXRBP28702 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RXRBP28702 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RXRBP28702 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RXRBP28702 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.35■■■□□ 2.45
RXRBP28702 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RXRBP28702 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.35■■■□□ 2.45
RXRBP28702 AP004609.3-201ENST00000610705 1884 ntBASIC30.35■■■□□ 2.45
RXRBP28702 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RXRBP28702 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.34■■■□□ 2.45
RXRBP28702 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RXRBP28702 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RXRBP28702 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.34■■■□□ 2.45
RXRBP28702 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC30.34■■■□□ 2.45
RXRBP28702 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RXRBP28702 AL121832.2-201ENST00000610979 668 ntBASIC30.34■■■□□ 2.45
RXRBP28702 MDK-213ENST00000617138 635 ntTSL 2 BASIC30.34■■■□□ 2.45
RXRBP28702 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RXRBP28702 AC131274.2-201ENST00000580697 1507 ntBASIC30.33■■■□□ 2.45
RXRBP28702 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.33■■■□□ 2.45
RXRBP28702 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RXRBP28702 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.33■■■□□ 2.45
RXRBP28702 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
RXRBP28702 TSPY6P-201ENST00000448518 926 ntBASIC30.33■■■□□ 2.45
RXRBP28702 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RXRBP28702 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
RXRBP28702 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC30.33■■■□□ 2.45
RXRBP28702 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms