Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.59■□□□□ 0.89
GDF1P27539 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 AC110285.6-201ENST00000617652 491 ntBASIC20.59■□□□□ 0.89
GDF1P27539 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GDF1P27539 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
GDF1P27539 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDF1P27539 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.58■□□□□ 0.89
GDF1P27539 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDF1P27539 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDF1P27539 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GDF1P27539 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
GDF1P27539 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDF1P27539 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.58■□□□□ 0.88
GDF1P27539 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDF1P27539 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
GDF1P27539 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
GDF1P27539 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF1P27539 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDF1P27539 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDF1P27539 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.57■□□□□ 0.88
GDF1P27539 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GDF1P27539 AC019069.1-201ENST00000610008 1333 ntBASIC20.56■□□□□ 0.88
GDF1P27539 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF1P27539 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.56■□□□□ 0.88
GDF1P27539 AC141586.4-201ENST00000624558 1573 ntBASIC20.56■□□□□ 0.88
GDF1P27539 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.56■□□□□ 0.88
GDF1P27539 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GDF1P27539 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.56■□□□□ 0.88
GDF1P27539 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 AC092171.4-201ENST00000609130 632 ntBASIC20.56■□□□□ 0.88
GDF1P27539 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.56■□□□□ 0.88
GDF1P27539 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF1P27539 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GDF1P27539 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.56■□□□□ 0.88
GDF1P27539 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF1P27539 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GDF1P27539 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GDF1P27539 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 UNC93B3-201ENST00000308076 687 ntBASIC20.55■□□□□ 0.88
GDF1P27539 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GDF1P27539 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 AL139125.2-201ENST00000623134 1869 ntBASIC20.55■□□□□ 0.88
GDF1P27539 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.55■□□□□ 0.88
GDF1P27539 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.55■□□□□ 0.88
GDF1P27539 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF1P27539 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF1P27539 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF1P27539 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF1P27539 MIR638-201ENST00000385237 100 ntBASIC20.54■□□□□ 0.88
GDF1P27539 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF1P27539 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GDF1P27539 LINC00543-201ENST00000567234 1845 ntBASIC20.54■□□□□ 0.88
GDF1P27539 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF1P27539 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
GDF1P27539 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GDF1P27539 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
GDF1P27539 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.53■□□□□ 0.88
GDF1P27539 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF1P27539 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF1P27539 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF1P27539 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.53■□□□□ 0.88
GDF1P27539 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.53■□□□□ 0.88
GDF1P27539 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF1P27539 DUX4L19-201ENST00000557448 1267 ntBASIC20.53■□□□□ 0.88
GDF1P27539 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF1P27539 C17orf82-201ENST00000623772 1530 ntBASIC20.53■□□□□ 0.88
GDF1P27539 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF1P27539 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 PBX2P1-201ENST00000493219 1291 ntBASIC20.52■□□□□ 0.88
GDF1P27539 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 AC099791.2-201ENST00000605725 427 ntBASIC20.52■□□□□ 0.88
GDF1P27539 AL136162.1-201ENST00000607711 1078 ntBASIC20.52■□□□□ 0.88
GDF1P27539 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GDF1P27539 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF1P27539 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GDF1P27539 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.51■□□□□ 0.87
GDF1P27539 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF1P27539 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms